2wp7

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Crystal structure of deSUMOylase(DUF862)Crystal structure of deSUMOylase(DUF862)

Structural highlights

2wp7 is a 1 chain structure with sequence from Lk3 transgenic mice. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[DESI1_MOUSE] Protease which deconjugates SUMO1, SUMO2 and SUMO3 from some substrate proteins. Has isopeptidase but not SUMO-processing activity. Desumoylates ZBTB46.[1] [2]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Post-translational modification by SUMO can be reversed by SENPs, the first known class of deSUMOylase. Recently, we identified a new deSUMOylating enzyme DeSI-1, which is distinct from SENPs and belongs to the putative deubiquitinating isopeptidase PPPDE superfamily. Herein, we report the crystal structure of DeSI-1, revealing that this enzyme forms a homodimer and that the groove between the two subunits is the active site harboring two absolutely conserved cysteine and histidine residues which form a catalytic dyad. We also show that DeSI-1 exhibits an extremely low endopeptidase activity toward precursor forms of SUMO-1 and SUMO-2, unlike SENPs. Proteins 2012. (c) 2012 Wiley-Liss, Inc.

Crystal structure of DeSI-1, a novel deSUMOylase belonging to a putative isopeptidase superfamily.,Suh HY, Kim JH, Woo JS, Ku B, Shin EJ, Yun Y, Oh BH Proteins. 2012 Apr 13. doi: 10.1002/prot.24093. PMID:22498933[3]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Shin EJ, Shin HM, Nam E, Kim WS, Kim JH, Oh BH, Yun Y. DeSUMOylating isopeptidase: a second class of SUMO protease. EMBO Rep. 2012 Apr;13(4):339-46. doi: 10.1038/embor.2012.3. PMID:22370726 doi:http://dx.doi.org/10.1038/embor.2012.3
  2. Suh HY, Kim JH, Woo JS, Ku B, Shin EJ, Yun Y, Oh BH. Crystal structure of DeSI-1, a novel deSUMOylase belonging to a putative isopeptidase superfamily. Proteins. 2012 Apr 13. doi: 10.1002/prot.24093. PMID:22498933 doi:10.1002/prot.24093
  3. Suh HY, Kim JH, Woo JS, Ku B, Shin EJ, Yun Y, Oh BH. Crystal structure of DeSI-1, a novel deSUMOylase belonging to a putative isopeptidase superfamily. Proteins. 2012 Apr 13. doi: 10.1002/prot.24093. PMID:22498933 doi:10.1002/prot.24093

2wp7, resolution 1.90Å

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