5g2x

Structure a of Group II Intron Complexed with its Reverse TranscriptaseStructure a of Group II Intron Complexed with its Reverse Transcriptase

5g2x, resolution 3.80Å Show:Asymmetric Unit Biological Assembly Structural highlights 5g2x is a 3 chain structure with sequence from [1] and "streptococcus_hollandicus"_scholl_1891 "streptococcus hollandicus" scholl 1891. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Related: 5g2y Gene: LTRA, MATR ("Streptococcus hollandicus" Scholl 1891) Experimental data: Check Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function [LTRA_LACLC] Multifunctional protein that promotes group II intron splicing and mobility by acting both on RNA and DNA. It has three activities: reverse transcriptase (RT) for intron duplication, maturase to promote splicing, and DNA endonuclease for site-specific cleavage of recipient alleles. The intron-encoded protein promotes splicing by facilitating the formation of the catalytically active structure of the intron RNA. After splicing, the protein remains bound to the excised intron lariat RNA, forming ribonucleoprotein particles, and cleaving the antisense strand of the recipient DNA in the 3' exon. After DNA cleavage, retrohoming occurs by a target DNA-primed reverse transcription of the intron RNA that had reverse spliced into the sense strand of the recipient DNA. It also contributes to the recognition of the DNA target site and acts as a repressor of its own translation. Publication Abstract from PubMed Bacterial group II introns are large catalytic RNAs related to nuclear spliceosomal introns and eukaryotic retrotransposons. They self-splice, yielding mature RNA, and integrate into DNA as retroelements. A fully active group II intron forms a ribonucleoprotein complex comprising the intron ribozyme and an intron-encoded protein that performs multiple activities including reverse transcription, in which intron RNA is copied into the DNA target. Here we report cryo-EM structures of an endogenously spliced Lactococcus lactis group IIA intron in its ribonucleoprotein complex form at 3.8-A resolution and in its protein-depleted form at 4.5-A resolution, revealing functional coordination of the intron RNA with the protein. Remarkably, the protein structure reveals a close relationship between the reverse transcriptase catalytic domain and telomerase, whereas the active splicing center resembles the spliceosomal Prp8 protein. These extraordinary similarities hint at intricate ancestral relationships and provide new insights into splicing and retromobility. Structure of a group II intron in complex with its reverse transcriptase.,Qu G, Kaushal PS, Wang J, Shigematsu H, Piazza CL, Agrawal RK, Belfort M, Wang HW Nat Struct Mol Biol. 2016 May 2. doi: 10.1038/nsmb.3220. PMID:27136327 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.