FirstGlance/Index

A list of pages and resources related to FirstGlance in Jmol:

Proteopedia PagesProteopedia Pages

FirstGlance in Jmol - Overview of the software package and its integration into Proteopedia.

AlphaFold: How to predict structures has a section on the advantages of visualization of predicted structures in FirstGlance.
Biological Unit tells how to visualize the biological unit in FirstGlance.
Cation-pi interactions mentions that FirstGlance has a tool to display these easily.
ConSurf Quick Analysis Procedure mentions using FirstGlance to visualize ConSurf results.
Disulfide bond mentions FirstGlance's tool that highlights these and quantitates all sulfurs and seleniums.
Electron density maps mentions how easy it is to see them in FirstGlance, and provides animated illustrations from FirstGlance.
FirstGlance/Evaluating Protein Crosslinks
Free R tells how FirstGlance helps to interpret free R.

Help:Copying FirstGlance Scenes into Proteopedia
Hydrogen bonds describes the Contacts & Non-Covalent Interactions tool in FirstGlance.
How to see conserved regions includes a section on FirstGlance.
Interpreting ConSurf Results discusses advantages of using FirstGlance.
Practical Guide to Homology Modeling a section on visualizing predicted structures in FirstGlance.
Protein crosslinks: FirstGlance automatically detects and alerts you to six unusual types.
Salt bridges mentions that FirstGlance has a tool to display these easily.
Introduction to Structural Bioinformatics: Syllabi and assessment tools based heavily on use of FirstGlance by students.
Temperature value mentions the use of FirstGlance to color by temperature, and to list missing residues and incomplete sidechains.