2oex

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Structure of ALIX/AIP1 V DomainStructure of ALIX/AIP1 V Domain

Structural highlights

2oex is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Related:2oev, 2oew
Gene:PDCD6IP, AIP1, ALIX, KIAA1375 (Homo sapiens)
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

ALIX/AIP1 functions in enveloped virus budding, endosomal protein sorting, and many other cellular processes. Retroviruses, including HIV-1, SIV, and EIAV, bind and recruit ALIX through YPX(n)L late-domain motifs (X = any residue; n = 1-3). Crystal structures reveal that human ALIX is composed of an N-terminal Bro1 domain and a central domain that is composed of two extended three-helix bundles that form elongated arms that fold back into a "V." The structures also reveal conformational flexibility in the arms that suggests that the V domain may act as a flexible hinge in response to ligand binding. YPX(n)L late domains bind in a conserved hydrophobic pocket on the second arm near the apex of the V, whereas CHMP4/ESCRT-III proteins bind a conserved hydrophobic patch on the Bro1 domain, and both interactions are required for virus budding. ALIX therefore serves as a flexible, extended scaffold that connects retroviral Gag proteins to ESCRT-III and other cellular-budding machinery.

Structural and biochemical studies of ALIX/AIP1 and its role in retrovirus budding.,Fisher RD, Chung HY, Zhai Q, Robinson H, Sundquist WI, Hill CP Cell. 2007 Mar 9;128(5):841-52. PMID:17350572[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Fisher RD, Chung HY, Zhai Q, Robinson H, Sundquist WI, Hill CP. Structural and biochemical studies of ALIX/AIP1 and its role in retrovirus budding. Cell. 2007 Mar 9;128(5):841-52. PMID:17350572 doi:http://dx.doi.org/10.1016/j.cell.2007.01.035

2oex, resolution 2.58Å

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