2hcd

From Proteopedia
Revision as of 23:23, 12 November 2007 by OCA (talk | contribs) (New page: left|200px<br /> <applet load="2hcd" size="450" color="white" frame="true" align="right" spinBox="true" caption="2hcd, resolution 2.6Å" /> '''Crystal structure of...)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search
File:2hcd.gif


2hcd, resolution 2.6Å

Drag the structure with the mouse to rotate

Crystal structure of the ligand binding domain of the Vitamin D nuclear receptor in complex with Gemini and a coactivator peptide

OverviewOverview

The crystal structure of the ligand binding domain (LBD) of the wild-type, Vitamin D receptor (VDR) of zebrafish bound to Gemini, a synthetic agonist, ligand with two identical side chains branching at carbon 20 reveals a, ligand-dependent structural rearrangement of the ligand binding pocket, (LBP). The rotation of a Leu side chain opens the access to a channel that, can accommodate the second side chain of the ligand. The 25% increase of, the LBP's volume does not alter the essential agonist features of VDR. The, possibility to adapt the LBP to novel ligands with different chemistry, and/or structure opens new perspectives in the design of more specifically, targeted ligands.

About this StructureAbout this Structure

2HCD is a Protein complex structure of sequences from Danio rerio with BIV as ligand. Full crystallographic information is available from OCA.

ReferenceReference

Adaptability of the Vitamin D nuclear receptor to the synthetic ligand Gemini: remodelling the LBP with one side chain rotation., Ciesielski F, Rochel N, Moras D, J Steroid Biochem Mol Biol. 2007 Mar;103(3-5):235-42. Epub 2007 Jan 10. PMID:17218092

Page seeded by OCA on Mon Nov 12 22:30:15 2007

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA