ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITYROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY

Structural highlights

1c3t is a 1 chain structure with sequence from Homo sapiens. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

 

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

We present direct evidence for a change in protein structural specificity due to hydrophobic core packing. High resolution structural analysis of a designed core variant of ubiquitin reveals that the protein is in slow exchange between two conformations. Examination of side-chain rotamers indicates that this dynamic response and the lower stability of the protein are coupled to greater strain and mobility in the core. The results suggest that manipulating the level of side-chain strain may be one way of fine tuning the stability and specificity of proteins.

Rotamer strain as a determinant of protein structural specificity.,Lazar GA, Johnson EC, Desjarlais JR, Handel TM Protein Sci. 1999 Dec;8(12):2598-610. PMID:10631975[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Lazar GA, Johnson EC, Desjarlais JR, Handel TM. Rotamer strain as a determinant of protein structural specificity. Protein Sci. 1999 Dec;8(12):2598-610. PMID:10631975
Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA