Structure of the rhesus monkey TRIM5alpha PRYSPRY domainStructure of the rhesus monkey TRIM5alpha PRYSPRY domain

Structural highlights

2lm3 is a 1 chain structure with sequence from Macaca mulatta. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:TRIM5 (Macaca mulatta)
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

Tripartite motif protein TRIM5alpha blocks retroviral replication after cell entry, and species-specific differences in its activity are determined by sequence variations within the C-terminal B30.2/PRYSPRY domain. Here we report a high-resolution structure of a TRIM5alpha PRYSPRY domain, the PRYSPRY of the rhesus monkey TRIM5alpha that potently restricts HIV infection, and identify features involved in its interaction with the HIV capsid. The extensive capsid-binding interface maps on the structurally divergent face of the protein formed by hypervariable loop segments, confirming that TRIM5alpha evolution is largely determined by its binding specificity. Interactions with the capsid are mediated by flexible variable loops via a mechanism that parallels antigen recognition by IgM antibodies, a similarity that may help explain some of the unusual functional properties of TRIM5alpha. Distinctive features of this pathogen-recognition interface, such as structural plasticity conferred by the mobile v1 segment and interaction with multiple epitopes, may allow restriction of divergent retroviruses and increase resistance to capsid mutations.

Structure of the rhesus monkey TRIM5alpha PRYSPRY domain, the HIV capsid recognition module.,Biris N, Yang Y, Taylor AB, Tomashevski A, Guo M, Hart PJ, Diaz-Griffero F, Ivanov DN Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13278-83. doi:, 10.1073/pnas.1203536109. Epub 2012 Jul 30. PMID:22847415[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Biris N, Yang Y, Taylor AB, Tomashevski A, Guo M, Hart PJ, Diaz-Griffero F, Ivanov DN. Structure of the rhesus monkey TRIM5alpha PRYSPRY domain, the HIV capsid recognition module. Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13278-83. doi:, 10.1073/pnas.1203536109. Epub 2012 Jul 30. PMID:22847415 doi:10.1073/pnas.1203536109
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