3miw

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Crystal Structure of Rotavirus NSP4Crystal Structure of Rotavirus NSP4

Structural highlights

3miw is a 10 chain structure with sequence from Rotavirus g4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Related:2o1j, 2o1k
Gene:G10 (Rotavirus G4)
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

The region spanning residues 95-146 of the rotavirus nonstructural protein NSP4 from the asymptomatic human strain ST3 has been purified and crystallized and diffraction data have been collected to a resolution of 2.6 A. Several attempts to solve the structure by the molecular-replacement method using the available tetrameric structures of this domain were unsuccessful despite a sequence identity of 73% to the already known structures. A more systematic approach with a dimer as the search model led to an unexpected pentameric structure using the program Phaser. The various steps involved in arriving at this molecular-replacement solution, which unravelled a case of subtle variation between different oligomeric states unknown at the time of solving the structure, are presented in this paper.

A new pentameric structure of rotavirus NSP4 revealed by molecular replacement.,Chacko AR, Jeyakanthan J, Ueno G, Sekar K, Rao CD, Dodson EJ, Suguna K, Read RJ Acta Crystallogr D Biol Crystallogr. 2012 Jan;68(Pt 1):57-61. Epub 2011 Dec 9. PMID:22194333[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Chacko AR, Jeyakanthan J, Ueno G, Sekar K, Rao CD, Dodson EJ, Suguna K, Read RJ. A new pentameric structure of rotavirus NSP4 revealed by molecular replacement. Acta Crystallogr D Biol Crystallogr. 2012 Jan;68(Pt 1):57-61. Epub 2011 Dec 9. PMID:22194333 doi:10.1107/S0907444911049705

3miw, resolution 2.50Å

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