4dj3

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Unwinding the Differences of the Mammalian PERIOD Clock Proteins from Crystal Structure to Cellular FunctionUnwinding the Differences of the Mammalian PERIOD Clock Proteins from Crystal Structure to Cellular Function

Structural highlights

4dj3 is a 2 chain structure with sequence from Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:3gdi, 4dj2, 1wa9
Gene:Per3 (Mus musculus)
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

The three PERIOD homologues mPER1, mPER2, and mPER3 constitute central components of the mammalian circadian clock. They contain two PAS (PER-ARNT-SIM) domains (PAS-A and PAS-B), which mediate homo- and heterodimeric mPER-mPER interactions as well as interactions with transcription factors and kinases. Here we present crystal structures of PAS domain fragments of mPER1 and mPER3 and compare them with the previously reported mPER2 structure. The structures reveal homodimers, which are mediated by interactions of the PAS-B beta-sheet surface including a highly conserved tryptophan (Trp448(mPER1), Trp419(mPER2), Trp359(mPER3)). mPER1 homodimers are additionally stabilized by interactions between the PAS-A domains and mPER3 homodimers by an N-terminal region including a predicted helix-loop-helix motive. We have verified the existence of these homodimer interfaces in solution and inside cells using analytical gel filtration and luciferase complementation assays and quantified their contributions to homodimer stability by analytical ultracentrifugation. We also show by fluorescence recovery after photobleaching analyses that destabilization of the PAS-B/tryptophan dimer interface leads to a faster mobility of mPER2 containing complexes in human U2OS cells. Our study reveals structural and quantitative differences between the homodimeric interactions of the three mouse PERIOD homologues, which are likely to contribute to their distinct clock functions.

Unwinding the differences of the mammalian PERIOD clock proteins from crystal structure to cellular function.,Kucera N, Schmalen I, Hennig S, Ollinger R, Strauss HM, Grudziecki A, Wieczorek C, Kramer A, Wolf E Proc Natl Acad Sci U S A. 2012 Feb 13. PMID:22331899[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Kucera N, Schmalen I, Hennig S, Ollinger R, Strauss HM, Grudziecki A, Wieczorek C, Kramer A, Wolf E. Unwinding the differences of the mammalian PERIOD clock proteins from crystal structure to cellular function. Proc Natl Acad Sci U S A. 2012 Feb 13. PMID:22331899 doi:10.1073/pnas.1113280109

4dj3, resolution 2.50Å

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