User:Tommie Hata/Protein Structure Tutorial: Difference between revisions

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'''Lysozyme, PDB ID [[2lyz]]'''
'''Lysozyme, PDB ID [[2lyz]]'''


<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Amino_acids_and_sidechains/2'>Amino acids and sidechains</scene>
Proteins are polymers of amino acids.  Yada yada yada...
 
The "backbone" of the protein is made up of carbons and nitrogens.  The amino acid sidechain extends out of the backbone. 
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Amino_acids_and_sidechains/2'>Here</scene>, the backbone is colored in CPK coloring and the sidechains are colored green.  The linear sequence of amino acids in a polypeptide is referred to as its "primary structure".


<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Secondary_structure/2'>Secondary Structure</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Secondary_structure/2'>Secondary Structure</scene>


<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Ionic_interaction/1'>Ionic Interactions</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Ionic_interaction/1'>Ionic Interactions</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Ionic_interaction_with_surface/1'>Ionic Interactions with surface</scene>


<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Polar_and_charged/1'>Polar and charged sidechains</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Polar_and_charged/1'>Polar and charged sidechains</scene>
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<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Ssbond-alpha-carbon/1'>SS bond, between alpha carbons</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Ssbond-alpha-carbon/1'>SS bond, between alpha carbons</scene>
<scene name='User:Tommie_Hata/Protein_Structure_Tutorial/Default/5'>Default</scene>

Revision as of 02:14, 15 July 2009

Insert caption here

Drag the structure with the mouse to rotate

Lysozyme, PDB ID 2lyz

Proteins are polymers of amino acids. Yada yada yada...

The "backbone" of the protein is made up of carbons and nitrogens. The amino acid sidechain extends out of the backbone. , the backbone is colored in CPK coloring and the sidechains are colored green. The linear sequence of amino acids in a polypeptide is referred to as its "primary structure".