User:Michael Strong/H1N1: Difference between revisions

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Shown below are Protein Structural Homology Models of the PB2, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 proteins from the Mexico A/Mexico/InDRE4487/2009 H1N1 Swine flu genome. More detail on each protein, including Multiple Sequence Alignments, Sequence

Shown below are Protein Structural Homology Models of the PB2, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 proteins from the Mexico [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=643780 A/Mexico/InDRE4487/2009] H1N1 Swine flu genome. Sequence polymorphisms of the PB2, PB1, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 protein are also indicated, as identified by comparison of newly sequenced 2009 H1N1 strains from around the globe. More detail on each protein, including Multiple Sequence Alignments, Sequence Polymorphisms, and Sequence Homologs are provided on the individual protein pages. Protein sequences obtained from: http://www.ncbi.nlm.nih.gov/genomes/FLU/SwineFlu.html. Multiple sequence alignments of the PB2, PB1, PA, HA, NP, NA, MP, and NS proteins from 2009 H1N1 strains from Mexico, California, Texas, New York, and Canada are also provided below.

and ~~Clustal Multiple~~ Sequence ~~Alignmnents of~~ the ~~Protein Sequences from five strains of the recent 2009 H1N1 Swine Influenza Virus, including isolates~~ Protein sequences obtained from: http://www.ncbi.nlm.nih.gov/genomes/FLU/SwineFlu.html. Multiple sequence alignments of the PB2, PB1, PA, HA, NP, NA, MP, and NS proteins from H1N1 strains from Mexico, California, Texas, New York, and Canada are provided below. ~~More comprehensive Multiple Sequence Alignments are provided with the above links.~~

== PB2 Protein Structural Homolgy Model ==

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-Shown below are Protein Structural Homology Models of the PB2, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 proteins from the Mexico A/Mexico/InDRE4487/2009 H1N1 Swine flu genome.  More detail on each protein, including Multiple Sequence Alignments, Sequence
+Shown below are Protein Structural Homology Models of the PB2, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 proteins from the Mexico [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=643780 A/Mexico/InDRE4487/2009] H1N1 Swine flu genome.  Sequence polymorphisms of the PB2, PB1, PA, HA, NP, NA, MP1, MP2, NS1 and NS2 protein are also indicated, as identified by comparison of newly sequenced 2009 H1N1 strains from around the globe.  More detail on each protein, including Multiple Sequence Alignments, Sequence Polymorphisms, and Sequence Homologs are provided on the individual protein pages.  Protein sequences obtained from: http://www.ncbi.nlm.nih.gov/genomes/FLU/SwineFlu.html. Multiple sequence alignments of the PB2, PB1, PA, HA, NP, NA, MP, and NS proteins from 2009 H1N1 strains from Mexico, California, Texas, New York, and Canada are also provided below.
-and Clustal Multiple Sequence Alignmnents of the Protein Sequences from five strains of the recent 2009 H1N1 Swine Influenza Virus, including isolates   Protein sequences obtained from: http://www.ncbi.nlm.nih.gov/genomes/FLU/SwineFlu.html. Multiple sequence alignments of the PB2, PB1, PA, HA, NP, NA, MP, and NS proteins from H1N1 strains from Mexico, California, Texas, New York, and Canada are provided below.  More comprehensive Multiple Sequence Alignments are provided with the above links.
 == PB2 Protein Structural Homolgy Model ==