User:James D Watson/Using Jmol: Difference between revisions
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'''''Main | Style | Atoms | Off'''''<br/> | '''''Main | Style | Atoms | Off'''''<br/> | ||
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This leaves the remaining bound small molecules. Explore the structure some more to confirm the identity of these tightly bound molecules as the haem groups (''Hint: Toggle off the spinning and click on the Jmol window. Moving your cursor over an atom should provide a pop-up window identifying that atom/residue'').<br/ | This leaves the remaining bound small molecules (<scene name='User:James_D_Watson/Using_Jmol/Haemoglobin_checkpoint2/1'>"Check Section"</scene>). Explore the structure some more to confirm the identity of these tightly bound molecules as the haem groups (''Hint: Toggle off the spinning and click on the Jmol window. Moving your cursor over an atom should provide a pop-up window identifying that atom/residue'').<br/> | ||
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Now let's focus in on a haem group to see how it interacts with the protein. redisplay the pigment, this time as a "ball and stick" model, and also with the atoms colored by element. | Now let's focus in on a haem group to see how it interacts with the protein. redisplay the pigment, this time as a "ball and stick" model, and also with the atoms colored by element. | ||