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Human Glutamine Synthetase Tertiary Structure: Pfam domains
 
-(describe structure of protein leading in to a single chain)
-each chain contains 2 domains, the Glutamine synthetase beta grasp domain(N-terminus), and the glutamine synthetase catalytic domain (the C-terminus). In order to stabilize the molecule, the two domains are involved in the Van der Walls , Hydrogen . The Beta Grasp  domain interact with the C-terminus of the next subunit.
-the two domains are proceeded by a meander of 3-24 residues that link the chains in the proteins core.
 
Beta Grasp domain (N-terminus)
-comprised of residues 43-123
-binds glutamate, ammonia, and ATP
<show protein alignment image>
<show structure of the domain in viewer>
 
Catalytic domain (C-terminus)
-comprised of residues 129-382
-how it functions is not described, more research is necessary here
 
<show alignment image>
<show structure of the domain in viewer>
 
Active site
-there are 10 active sites in the decamer of the protein, each formed from the beta grasp domain of one chain and the catalytic domain of the neighboring chain.  
<show relation between chains, domains, and active sites with viewer>
-describe visually the important aspects of the active site
<show active site and ligands relationship, may need multiple scenes>

Revision as of 00:25, 6 December 2008

Human Glutamine Synthetase Tertiary Structure: Pfam domains

-(describe structure of protein leading in to a single chain) -each chain contains 2 domains, the Glutamine synthetase beta grasp domain(N-terminus), and the glutamine synthetase catalytic domain (the C-terminus). In order to stabilize the molecule, the two domains are involved in the Van der Walls , Hydrogen . The Beta Grasp domain interact with the C-terminus of the next subunit. -the two domains are proceeded by a meander of 3-24 residues that link the chains in the proteins core.

Beta Grasp domain (N-terminus) -comprised of residues 43-123 -binds glutamate, ammonia, and ATP <show protein alignment image> <show structure of the domain in viewer>

Catalytic domain (C-terminus) -comprised of residues 129-382 -how it functions is not described, more research is necessary here

<show alignment image> <show structure of the domain in viewer>

Active site -there are 10 active sites in the decamer of the protein, each formed from the beta grasp domain of one chain and the catalytic domain of the neighboring chain. <show relation between chains, domains, and active sites with viewer> -describe visually the important aspects of the active site <show active site and ligands relationship, may need multiple scenes>

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Eric Martz, Adrian Aldrich, Kurt Giles, Donald Voet, Vivian Liang, Shuvo Roy