PyMOL: Difference between revisions

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[http://pymol.org PyMOL] is a [[Molecular modeling and visualization software|molecular visualization]] stand-alone program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren Delano]. It has an innovative license: it is open source, but not necessarily free: current ready-to-run downloads (binaries) and up-to-date documentation require payment of modest annual subscription fees. However, a free version is available to educators for use in teaching students, and out-of-date binary builds can be freely downloaded as well.
[http://pymol.org PyMOL] is a [[Molecular modeling and visualization software|molecular visualization]] stand-alone program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of [http://www.delanoscientific.com/ Warren Delano]. It has an innovative license: it is open source, but not free in all forms: the author's current ready-to-run downloads (binaries) and up-to-date documentation require payment of modest annual subscription fees. However, a [http://pymol.org/educational free version] is available to educators for use in teaching students, out-of-date binary builds can be freely downloaded, and some Linux distributions offer PyMOL packages compiled from the open-source code.


The "Py" in PyMOL refers to the [[http://python.org Python language]] an integral part of the Package.  Python enables users to control PyMOL with simple command scripts or to develop plugins and programs with their own custom user interfaces.  
PyMOL has a strong user community which interacts via the [http://sourceforge.net/mail/?group_id=4546 PyMOL-Users] mailing list and operates the [http://pymolwiki.org PyMOL Wiki] documentation site.  The "Py" in PyMOL refers to the [http://python.org Python language], an integral part of the package.  Python enables users to automate PyMOL with simple command scripts and to develop their own custom user interfaces.


==See Also==
==See Also==

Revision as of 19:19, 8 November 2008

PyMOL is a molecular visualization stand-alone program that is very popular with protein crystallographers because of the high quality of its rendering, its speed and versatility. A large percentage of the figures in journal publications reporting new macromolecular structures are created using PyMOL. PyMOL is the creation of Warren Delano. It has an innovative license: it is open source, but not free in all forms: the author's current ready-to-run downloads (binaries) and up-to-date documentation require payment of modest annual subscription fees. However, a free version is available to educators for use in teaching students, out-of-date binary builds can be freely downloaded, and some Linux distributions offer PyMOL packages compiled from the open-source code.

PyMOL has a strong user community which interacts via the PyMOL-Users mailing list and operates the PyMOL Wiki documentation site. The "Py" in PyMOL refers to the Python language, an integral part of the package. Python enables users to automate PyMOL with simple command scripts and to develop their own custom user interfaces.

See AlsoSee Also

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Eric Martz, Warren DeLano, Eran Hodis, Wayne Decatur, Jaime Prilusky