User:Tom Gluick/glutamine synthetase: Difference between revisions
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<span style="color:green">'''Assignment 4: IIB: Tertiary Structure:''' </span> Map polar/nonpolar or charged and uncharged regions of GS monomers. Use space filling model. Map where polar and nonpolar residues are located in the protein. Comment on significance.<ref>Yamashita, M. M., ''et.al.,'' Refined Atolnic Model of Glutamine Synthetase at 3.5 A Resolution, J Biol Chem 1989 264: 17681-17690.</ref> | <span style="color:green">'''Assignment 4: IIB: Tertiary Structure:''' </span> Map polar/nonpolar or charged and uncharged regions of GS monomers. Use space filling model. Map where polar and nonpolar residues are located in the protein. Comment on significance.<ref>Yamashita, M. M., ''et.al.,'' Refined Atolnic Model of Glutamine Synthetase at 3.5 A Resolution, J Biol Chem 1989 264: 17681-17690.</ref> | ||
<span style="color:green">'''Assignment 5: IIC: Secondary Structure:''' </span> Dissect a monomer into secondary structure elements. You may want to include a wiring diagram or use the wiring diagram in PDBsum[http://www.ebi.ac.uk/pdbsum/] as an aid in presenting. Briefly comment on the significance of the elements when required. | <span style="color:green">'''Assignment 5: IIC: Secondary Structure:''' </span> Dissect a monomer into secondary structure elements. You may want to include a wiring diagram or use the wiring diagram in PDBsum[http://www.ebi.ac.uk/pdbsum/] as an aid in presenting. Briefly comment on the significance of the elements when required. | ||
<span style="color:green">'''Assignment 6: IID: Primary Structure:'''</span> Map the conserved residues on an individual subunit. Comment on the significance of the conservation using applets or images to enhance discussion of the topic. See discussion of Wiki Colors in Help: Editing to be used to enhanced your presentation.<ref name="review"> <br/> | <span style="color:green">'''Assignment 6: IID: Primary Structure:'''</span> Map the conserved residues on an individual subunit. Comment on the significance of the conservation using applets or images to enhance discussion of the topic. See discussion of Wiki Colors in Help: Editing to be used to enhanced your presentation.<ref name="review"> <br/> | ||
<span style="color:green">'''Assignment 7: IIIA: β-loop:'''</span> Map the interactions stabilizing quaternary structure. Explain how these interactions contribute to quaternary structure stability. | <span style="color:green">'''Assignment 7: IIIA: β-loop:'''</span> Map the interactions stabilizing quaternary structure. Explain how these interactions contribute to quaternary structure stability.<br/> | ||
<span style="color:green">'''Assignment 8: IIIB: Central-loop:''' </span> Map the interactions involving the central loop that stabilize quaternary structure. Explain how these interactions contribute to quaternary structure stability.<ref name="review"><ref name="35structure"><br/> | <span style="color:green">'''Assignment 8: IIIB: Central-loop:''' </span> Map the interactions involving the central loop that stabilize quaternary structure. Explain how these interactions contribute to quaternary structure stability.<ref name="review"><ref name="35structure"><br/> | ||