Proteopedia:Wishlist: Difference between revisions
moved up MSE bug |
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*Have selenomethionine (MSE) treated as any other amino acid in the (Jmol) default settings - [[User:Morten Grøftehauge]]- June 1, 2008 | *Have selenomethionine (MSE) treated as any other amino acid in the (Jmol) default settings - [[User:Morten Grøftehauge]]- June 1, 2008 | ||
I agree that it is very strange to have MSE treated as a ligand! Fixing this is far more important than adding new display options, like 2 jmols, so I'm moving this up. - [[User:Kevin Karplus]] -18 Aug 2008 | I agree that it is very strange to have MSE treated as a ligand! Fixing this is far more important than adding new display options, like 2 jmols, so I'm moving this up. - [[User:Kevin Karplus]] -18 Aug 2008 | ||
* Mechanism to spawn (open) a '''child window containing only Jmol''' with the current scene. Advantages: the child window can be resized, thereby resizing Jmol; the child window can be kept in view while the text in the parent Proteopedia window is scrolled. It should be possible to have green links work on both the Jmol on the Proteopedia page, and the child Jmol. [[User:Emartz|Emartz]] 00:06, 17 March 2008 (IST) | *<span style="background-color:yellow;color:green">'''SOLVED:'''</span>'' Mechanism to spawn (open) a '''child window containing only Jmol''' with the current scene. Advantages: the child window can be resized, thereby resizing Jmol; the child window can be kept in view while the text in the parent Proteopedia window is scrolled. It should be possible to have green links work on both the Jmol on the Proteopedia page, and the child Jmol. [[User:Emartz|Emartz]] 00:06, 17 March 2008 (IST). Implemented automatically generated button to spawn a popup window [[User:Jaime Prilusky|Jaime Prilusky]] 10:16, 19 August 2008 (IDT) | ||
* Automatically '''front, center, and size''' ligands and sites when their green links are clicked. That is, the molecule should rotate to put the selected entity in front of its center of mass, the selected entity should become the center of rotation/zoom, and the molecule should be zoomed (up or down) to make the selected entity fill e.g. 75% of the Jmol diameter. | * Automatically '''front, center, and size''' ligands and sites when their green links are clicked. That is, the molecule should rotate to put the selected entity in front of its center of mass, the selected entity should become the center of rotation/zoom, and the molecule should be zoomed (up or down) to make the selected entity fill e.g. 75% of the Jmol diameter. | ||
* <span style="background-color:yellow;color:green">'''SOLVED:'''</span> (March 2, 2008): Quality (antialiasing) chosen by the user with "toggle quality" should remain in effect for all green links within that page. Imagine that you're projecting scenes to a class. Currently, with every new scene, you have to click "toggle quality" again to get high quality. | * <span style="background-color:yellow;color:green">'''SOLVED:'''</span> (March 2, 2008): Quality (antialiasing) chosen by the user with "toggle quality" should remain in effect for all green links within that page. Imagine that you're projecting scenes to a class. Currently, with every new scene, you have to click "toggle quality" again to get high quality. | ||