User:Eric Martz/Sandbox 3: Difference between revisions

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ConfirmAccount, Editor, Tester, Administrators
27,351 edits
→‎2hhd_consurf.spt: revising scripts
Eric Martz (talk | contribs)
ConfirmAccount, Editor, Tester, Administrators
27,351 edits
→‎2hhd_consurf.spt: revising scripts
Line 282: Line 282:


<tt><pre>
<tt><pre>
xxxx
# generated from ConSurf files dated 2008-06-12
script "/wiki/scripts/allRenderingsOff.spt";
select hetero and not water
spacefill 0.5
wireframe 0.3
color cpk
dots
 
define ~con10 none
select PHE71, PHE85, PHE118
select selected and :B
select selected or ~con10
define ~con10 selected
select PHE71, PHE85, PHE118
select selected and :D
select selected or ~con10
define ~con10 selected
color [255,255,150]
 
define ~con9 none
select LYS7, LYS16, GLU27, ARG31, PHE33, PRO37, THR39, LYS40, THR41, PHE43
select selected or SER52, HIS58, GLY59, LYS61, VAL62, ALA65, ALA69, LEU83, SER84
select selected or HIS87, ALA88, LEU91, ARG92, VAL93, ASP94, PRO95, ASN97, PHE98
select selected or LEU101, HIS122, SER124, ASP126, LYS127, VAL132, LEU136
select selected or LYS139, TYR140, ARG141
select selected and :A
select selected or ~con9
define ~con9 selected
select VAL1, GLU7, LYS8, TRP15, GLY24, ARG30, LEU32, VAL34, TYR35, PRO36, TRP37
select selected or THR38, ARG40, PHE42, PHE45, GLY46, SER49, ALA53, ASN57, VAL60
select selected or ALA62, HIS63, GLY64, LYS66, VAL67, ASP79, LEU81, LYS82, LEU88
select selected or SER89, GLU90, HIS92, LEU96, VAL98, PRO100, ASN102, PHE103
select selected or LEU106, PHE122, GLN127, LYS132, VAL137, ALA140, TYR145
select selected or HIS146
select selected and :B
select selected or ~con9
define ~con9 selected
select LYS7, LYS16, GLU27, ARG31, PHE33, PRO37, THR39, LYS40, THR41, PHE43
select selected or SER52, HIS58, GLY59, LYS61, VAL62, ALA65, ALA69, LEU83, SER84
select selected or HIS87, ALA88, LEU91, ARG92, VAL93, ASP94, PRO95, ASN97, PHE98
select selected or LEU101, HIS122, SER124, ASP126, LYS127, VAL132, LEU136
select selected or LYS139, TYR140, ARG141
select selected and :C
select selected or ~con9
define ~con9 selected
select VAL1, GLU7, LYS8, TRP15, GLY24, ARG30, LEU32, VAL34, TYR35, PRO36, TRP37
select selected or THR38, ARG40, PHE42, PHE45, GLY46, SER49, ALA53, ASN57, VAL60
select selected or ALA62, HIS63, GLY64, LYS66, VAL67, ASP79, LEU81, LYS82, LEU88
select selected or SER89, GLU90, HIS92, LEU96, VAL98, PRO100, ASN102, PHE103
select selected or LEU106, PHE122, GLN127, LYS132, VAL137, ALA140, TYR145
select selected or HIS146
select selected and :D
select selected or ~con9
define ~con9 selected
color [160,37,96]
 
define ~con8 none
select VAL1, LEU2, SER3, ASP6, GLY25, LEU29, TYR42, HIS45, PHE46, ASP47, GLY51
select selected or GLN54, ASP74, ASP85, LEU86, VAL96, LYS99, HIS112, THR118
select selected or PRO119, ALA123, PHE128, VAL135
select selected and :A
select selected or ~con8
define ~con8 selected
select VAL18, LEU28, GLN39, PHE41, ASP47, LEU48, LEU91, CYS93, ASP94, HIS97
select selected or ASP99, GLU101, LEU105, GLY107, ASN108, ALA115, ALA129, ALA138
select selected or LEU141
select selected and :B
select selected or ~con8
define ~con8 selected
select VAL1, LEU2, SER3, ASP6, GLY25, LEU29, TYR42, HIS45, PHE46, ASP47, GLY51
select selected or GLN54, ASP74, ASP85, LEU86, VAL96, LYS99, HIS112, THR118
select selected or PRO119, ALA123, PHE128, VAL135
select selected and :C
select selected or ~con8
define ~con8 selected
select VAL18, LEU28, GLN39, PHE41, ASP47, LEU48, LEU91, CYS93, ASP94, HIS97
select selected or ASP99, GLU101, LEU105, GLY107, ASN108, ALA115, ALA129, ALA138
select selected or LEU141
select selected and :D
select selected or ~con8
define ~con8 selected
color [240,125,171]
 
define ~con7 none
select MET32, LEU66, ASP75, ALA79, LEU80, HIS103, VAL107, THR108, ALA110, PHE117
select selected or THR137, SER138
select selected and :A
select selected or ~con7
define ~con7 selected
select VAL11, LYS17, GLU26, ALA27, GLY29, LEU31, THR84, LYS95, GLN131, VAL134
select selected and :B
select selected or ~con7
define ~con7 selected
select MET32, LEU66, ASP75, ALA79, LEU80, HIS103, VAL107, THR108, ALA110, PHE117
select selected or THR137, SER138
select selected and :C
select selected or ~con7
define ~con7 selected
select VAL11, LYS17, GLU26, ALA27, GLY29, LEU31, THR84, LYS95, GLN131, VAL134
select selected and :D
select selected or ~con7
define ~con7 selected
color [250,201,222]
 
define ~con6 none
select TRP14, ALA28, PRO44, LYS60, HIS72, SER81, LYS90, SER102, CYS104, SER133
select selected and :A
select selected or ~con6
define ~con6 selected
select HIS2, LEU3, VAL33, ALA70, GLY74, HIS77, ALA86, VAL113, LEU114, THR123
select selected or PRO124, LYS144
select selected and :B
select selected or ~con6
define ~con6 selected
select TRP14, ALA28, PRO44, LYS60, HIS72, SER81, LYS90, SER102, CYS104, SER133
select selected and :C
select selected or ~con6
define ~con6 selected
select HIS2, LEU3, VAL33, ALA70, GLY74, HIS77, ALA86, VAL113, LEU114, THR123
select selected or PRO124, LYS144
select selected and :D
select selected or ~con6
define ~con6 selected
color [252,237,244]
 
define ~con5 none
select VAL17, ALA26, PHE36, LYS56, VAL70, LEU100, LEU106, VAL121
select selected and :A
select selected or ~con5
define ~con5 selected
select THR4, ASN19, LYS65, ASN80, VAL111, ALA128, VAL133, GLY136, HIS143
select selected and :B
select selected or ~con5
define ~con5 selected
select VAL17, ALA26, PHE36, LYS56, VAL70, LEU100, LEU106, VAL121
select selected and :C
select selected or ~con5
define ~con5 selected
select THR4, ASN19, LYS65, ASN80, VAL111, ALA128, VAL133, GLY136, HIS143
select selected and :D
select selected or ~con5
define ~con5 selected
color [255,255,255]
 
define ~con4 none
select HIS20, ALA21, LEU48, SER49, MET76, PRO77, LEU109, ALA120
select selected and :A
select selected or ~con4
define ~con4 selected
select GLU6, THR50, VAL54, LYS59, LEU68, SER72, HIS117
select selected and :B
select selected or ~con4
define ~con4 selected
select HIS20, ALA21, LEU48, SER49, MET76, PRO77, LEU109, ALA120
select selected and :C
select selected or ~con4
define ~con4 selected
select GLU6, THR50, VAL54, LYS59, LEU68, SER72, HIS117
select selected and :D
select selected or ~con4
define ~con4 selected
color [234,255,255]
 
define ~con3 none
select ASN9, VAL10, LYS11, SER35, THR38, HIS50, VAL55, HIS89, LEU125, ALA130
select selected or THR134
select selected and :A
select selected or ~con3
define ~con3 selected
select VAL20, MET55, LYS61, VAL109, ALA142
select selected and :B
select selected or ~con3
define ~con3 selected
select ASN9, VAL10, LYS11, SER35, THR38, HIS50, VAL55, HIS89, LEU125, ALA130
select selected or THR134
select selected and :C
select selected or ~con3
define ~con3 selected
select VAL20, MET55, LYS61, VAL109, ALA142
select selected and :D
select selected or ~con3
define ~con3 selected
color [215,255,255]
 
define ~con2 none
select GLU30, ALA53, THR67, ALA71, ALA82, LEU105, PRO114, LEU129
select selected and :A
select selected or ~con2
define ~con2 selected
select GLY25, LEU75, ALA76, LYS120, GLU121
select selected and :B
select selected or ~con2
define ~con2 selected
select GLU30, ALA53, THR67, ALA71, ALA82, LEU105, PRO114, LEU129
select selected and :C
select selected or ~con2
define ~con2 selected
select GLY25, LEU75, ALA76, LYS120, GLU121
select selected and :D
select selected or ~con2
define ~con2 selected
color [140,255,255]
 
define ~con1 none
select PRO4, ALA5, THR8, ALA12, ALA13, GLY15, GLY18, ALA19, GLY22, GLU23, TYR24
select selected or LEU34, GLY57, ALA63, ASP64, ASN68, VAL73, ASN78, ALA111
select selected or LEU113, ALA115, GLU116, SER131
select selected and :A
select selected or ~con1
define ~con1 selected
select PRO5, SER9, ALA10, THR12, ALA13, LEU14, GLY16, ASP21, GLU22, VAL23, GLU43
select selected or SER44, PRO51, ASP52, GLY56, PRO58, GLY69, ASP73, LEU78, GLY83
select selected or THR87, ARG104, LEU110, CYS112, HIS116, GLY119, PRO125, VAL126
select selected or TYR130, ALA135, ASN139
select selected and :B
select selected or ~con1
define ~con1 selected
select PRO4, ALA5, THR8, ALA12, ALA13, GLY15, GLY18, ALA19, GLY22, GLU23, TYR24
select selected or LEU34, GLY57, ALA63, ASP64, ASN68, VAL73, ASN78, ALA111
select selected or LEU113, ALA115, GLU116, SER131
select selected and :C
select selected or ~con1
define ~con1 selected
select PRO5, SER9, ALA10, THR12, ALA13, LEU14, GLY16, ASP21, GLU22, VAL23, GLU43
select selected or SER44, PRO51, ASP52, GLY56, PRO58, GLY69, ASP73, LEU78, GLY83
select selected or THR87, ARG104, LEU110, CYS112, HIS116, GLY119, PRO125, VAL126
select selected or TYR130, ALA135, ASN139
select selected and :D
select selected or ~con1
define ~con1 selected
color [16,200,209]
 
consurf_levels_defined = true
select protein
spacefill
backbone 0.4
color backbone [xc8c8c8]
select nucleic
cartoon
color cpk
 
</pre></tt>
</pre></tt>
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