'''ARGINASE FROM BACILLUS CALDEVELOX, COMPLEXED WITH L-ARGININE'''
===ARGINASE FROM BACILLUS CALDEVELOX, COMPLEXED WITH L-ARGININE===
==Overview==
<!--
BACKGROUND: Arginase is a manganese-dependent enzyme that catalyzes the hydrolysis of L-arginine to L-ornithine and urea. In ureotelic animals arginase is the final enzyme of the urea cycle, but in many species it has a wider role controlling the use of arginine for other metabolic purposes, including the production of creatine, polyamines, proline and nitric oxide. Arginase activity is regulated by various small molecules, including the product L-ornithine. The aim of these structural studies was to test aspects of the catalytic mechanism and to investigate the structural basis of arginase inhibition. RESULTS: We report here the crystal structures of arginase from Bacillus caldovelox at pH 5.6 and pH 8.5, and of binary complexes of the enzyme with L-arginine, L-ornithine and L-lysine at pH 8.5. The arginase monomer comprises a single compact alpha/beta domain that further associates into a hexameric quaternary structure. The binary complexes reveal a common mode of ligand binding, which places the substrate adjacent to the dimanganese centre. We also observe a conformational change that impacts on the active site and is coupled with the occupancy of an external site by guanidine or arginine. CONCLUSIONS: The structures reported here clarify aspects of the active site and indicate key features of the catalytic mechanism, including substrate coordination to one of the manganese ions and an orientational role for a neighboring histidine residue. Stereospecificity for L-amino acids is found to depend on their precise recognition at the active-site rim. Identification of a second arginine-binding site, remote from the active site, and associated conformational changes lead us to propose a regulatory role for this site in substrate hydrolysis.
The line below this paragraph, {{ABSTRACT_PUBMED_10196128}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 10196128 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_10196128}}
==About this Structure==
==About this Structure==
Line 33:
Line 37:
[[Category: Manganese metalloenzyme]]
[[Category: Manganese metalloenzyme]]
[[Category: Nitrogen metabolism]]
[[Category: Nitrogen metabolism]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 21:41:05 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 09:10:14 2008''
Revision as of 09:10, 29 July 2008
This article has been automatically seeded. Changes to this page should pertain to the PDB entry only and not to the protein or biomolecule in general.
Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily., Bewley MC, Jeffrey PD, Patchett ML, Kanyo ZF, Baker EN, Structure. 1999 Apr 15;7(4):435-48. PMID:10196128