2np7: Difference between revisions

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@@ Line 1: / Line 1: @@
 [[Image:2np7.gif|left|200px]]
- {{Structure
+<!--
-|PDB= 2np7 |SIZE=350|CAPTION= <scene name='initialview01'>2np7</scene>, resolution 1.90&Aring;
+The line below this paragraph, containing "STRUCTURE_2np7", creates the "Structure Box" on the page.
-|SITE=
+You may change the PDB parameter (which sets the PDB file loaded into the applet)
-|LIGAND= <scene name='pdbligand=3DR:1&#39;,2&#39;-DIDEOXYRIBOFURANOSE-5&#39;-PHOSPHATE'>3DR</scene>, <scene name='pdbligand=4PC:3-(2&#39;-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-6-METHYL-3,7-DIHYDRO-2H-PYRROLO[2,3-D]PYRIMIDIN-2-ONE'>4PC</scene>, <scene name='pdbligand=6MA:N6-METHYL-DEOXY-ADENOSINE-5&#39;-MONOPHOSPHATE'>6MA</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NEA:5&#39;-DEOXY-5&#39;-[2-(AMINO)ETHYLTHIO]ADENOSINE'>NEA</scene>
+or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Site-specific_DNA-methyltransferase_(adenine-specific) Site-specific DNA-methyltransferase (adenine-specific)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.72 2.1.1.72] </span>
+or leave the SCENE parameter empty for the default display.
-|GENE= taqIM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=271 Thermus aquaticus])
+-->
-|DOMAIN=
+{{STRUCTURE_2np7|  PDB=2np7  |  SCENE=  }}
-|RELATEDENTRY=[[1g38|1G38]], [[2adm|2ADM]], [[1aqi|1AQI]], [[1aqj|1AQJ]], [[2ih2|2IH2]], [[2ih4|2IH4]], [[2ih5|2IH5]], [[2np6|2NP6]], [[2ibs|2IBS]], [[2ibt|2IBT]]
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2np7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2np7 OCA], [http://www.ebi.ac.uk/pdbsum/2np7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2np7 RCSB]</span>
-}}
 '''Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing an abasic site analog at the target position and pyrrolo-dC at the target base partner position'''
@@ Line 18: / Line 15: @@
 NP7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NP7 OCA].
 [[Category: Single protein]]
-[[Category: Site-specific DNA-methyltransferase (adenine-specific)]]
 [[Category: Thermus aquaticus]]
 [[Category: Lenz, T.]]
 [[Category: Scheidig, A J.]]
 [[Category: Weinhold, E.]]
-[[Category: abasic site analog]]
+[[Category: Abasic site analog]]
-[[Category: base flipping]]
+[[Category: Base flipping]]
-[[Category: dna]]
+[[Category: Dna]]
-[[Category: dna methyltransferase]]
+[[Category: Dna methyltransferase]]
-[[Category: nucleotide flipping]]
+[[Category: Nucleotide flipping]]
-[[Category: pyrrolo-dc]]
+[[Category: Pyrrolo-dc]]
-[[Category: target base partner]]
+[[Category: Target base partner]]
-[[Category: transferase/dna complex]]
+[[Category: Transferase/dna complex]]
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 09:44:01 2008''
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:06:16 2008''