2htx: Difference between revisions

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[[Image:2htx.jpg|left|200px]]
[[Image:2htx.jpg|left|200px]]


{{Structure
<!--
|PDB= 2htx |SIZE=350|CAPTION= <scene name='initialview01'>2htx</scene>, resolution 1.56&Aring;
The line below this paragraph, containing "STRUCTURE_2htx", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=220:UNDECA-3,7-DIENE-1,3,7,11-TETRACARBALDEHYDE'>220</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
-->
|DOMAIN=
{{STRUCTURE_2htx| PDB=2htx  | SCENE= }}  
|RELATEDENTRY=[[2hu1|2HU1]], [[2hu3|2HU3]], [[2hub|2HUB]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htx OCA], [http://www.ebi.ac.uk/pdbsum/2htx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2htx RCSB]</span>
}}


'''Crystal Structure Analysis of Hen Egg White Lysozyme Crosslinked by Polymerized Glutaraldehyde in Acidic Environment'''
'''Crystal Structure Analysis of Hen Egg White Lysozyme Crosslinked by Polymerized Glutaraldehyde in Acidic Environment'''
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[[Category: Lagziel-Simis, S.]]
[[Category: Lagziel-Simis, S.]]
[[Category: Wine, Y.]]
[[Category: Wine, Y.]]
[[Category: crosslinked]]
[[Category: Crosslinked]]
[[Category: glutaraldehyde]]
[[Category: Glutaraldehyde]]
[[Category: hydrolase]]
[[Category: Hydrolase]]
[[Category: tetragonal]]
[[Category: Tetragonal]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 06:42:21 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:35:20 2008''

Revision as of 06:42, 4 May 2008

File:2htx.jpg

Template:STRUCTURE 2htx

Crystal Structure Analysis of Hen Egg White Lysozyme Crosslinked by Polymerized Glutaraldehyde in Acidic Environment


OverviewOverview

Glutaraldehyde has been used for several decades as an effective crosslinking agent for many applications including sample fixation for microscopy, enzyme and cell immobilization, and stabilization of protein crystals. Despite of its common use as a crosslinking agent, the mechanism and chemistry involved in glutaraldehyde crosslinking reaction is not yet fully understood. Here we describe feasibility study and results obtained from a new approach to investigate the process of protein crystals stabilization by glutaraldehyde crosslinking. It involves exposure of a model protein crystal (Lysozyme) to glutaraldehyde in alkaline or acidic pH for different incubation periods and reaction arrest by medium exchange with crystallization medium to remove unbound glutaraldehyde. The crystals were subsequently incubated in diluted buffer affecting dissolution of un-crosslinked crystals. Samples from the resulting solution were subjected to protein composition analysis by gel electrophoresis and mass spectroscopy while crosslinked, dissolution resistant crystals were subjected to high resolution X-ray structural analysis. Data from gel electrophoresis indicated that the crosslinking process starts at specific preferable crosslinking site by lysozyme dimer formation, for both acidic and alkaline pH values. These dimer formations were followed by trimer and tetramer formations leading eventually to dissolution resistant crystals. The crosslinking initiation site and the end products obtained from glutaraldehyde crosslinking in both pH ranges resulted from reactions between lysine residues of neighboring protein molecules and the polymeric form of glutaraldehyde. Reaction rate was much faster at alkaline pH. Different reaction end products, indicating different reaction mechanisms, were identified for crosslinking taking place under alkaline or acidic conditions.

About this StructureAbout this Structure

2HTX is a Single protein structure of sequence from Gallus gallus. Full crystallographic information is available from OCA.

ReferenceReference

Elucidation of the mechanism and end products of glutaraldehyde crosslinking reaction by X-ray structure analysis., Wine Y, Cohen-Hadar N, Freeman A, Frolow F, Biotechnol Bioeng. 2007 Oct 15;98(3):711-8. PMID:17461426 Page seeded by OCA on Sun May 4 06:42:21 2008

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