2f9o: Difference between revisions

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[[Image:2f9o.gif|left|200px]]
[[Image:2f9o.gif|left|200px]]


{{Structure
<!--
|PDB= 2f9o |SIZE=350|CAPTION= <scene name='initialview01'>2f9o</scene>, resolution 2.10&Aring;
The line below this paragraph, containing "STRUCTURE_2f9o", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Tryptase Tryptase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.59 3.4.21.59] </span>
or leave the SCENE parameter empty for the default display.
|GENE= TPSAB1, TPS1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_2f9o|  PDB=2f9o |  SCENE= }}  
|RELATEDENTRY=[[2f9n|2F9N]], [[2f9p|2F9P]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f9o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f9o OCA], [http://www.ebi.ac.uk/pdbsum/2f9o PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2f9o RCSB]</span>
}}


'''Crystal Structure of the Recombinant Human Alpha I Tryptase Mutant D216G'''
'''Crystal Structure of the Recombinant Human Alpha I Tryptase Mutant D216G'''
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[[Category: Selwood, T.]]
[[Category: Selwood, T.]]
[[Category: Than, M E.]]
[[Category: Than, M E.]]
[[Category: difucosylation]]
[[Category: Difucosylation]]
[[Category: serine proteinase]]
[[Category: Serine proteinase]]
[[Category: trypsin-like]]
[[Category: Trypsin-like]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 03:38:04 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:59:49 2008''

Revision as of 03:38, 4 May 2008

File:2f9o.gif

Template:STRUCTURE 2f9o

Crystal Structure of the Recombinant Human Alpha I Tryptase Mutant D216G


OverviewOverview

Tryptases alpha and beta are trypsin-like serine proteinases expressed in large amounts by mast cells. Beta-tryptase is a tetramer that has enzymatic activity, but requires heparin binding to maintain functional and structural stability, whereas alpha-tryptase has little, if any, enzymatic activity but is a stable tetramer in the absence of heparin. As shown previously, these differences can be mainly attributed to the different conformations of the 214-220 segment. Interestingly, the replacement of Asp216 by Gly, which is present in beta-tryptase, results in enzymatically active but less stable alpha-tryptase mutants. We have solved the crystal structures of both the single (D216G) and the double (K192Q/D216G) mutant forms of recombinant human alphaI-tryptase in complex with the peptide inhibitor leupeptin, as well as the structure of the non-inhibited single mutant. The inhibited mutants exhibited an open functional substrate binding site, while in the absence of an inhibitor, the open (beta-tryptase-like) and the closed (alpha-tryptase-like) conformations were present simultaneously. This shows that both forms are in a two-state equilibrium, which is influenced by the residues in the vicinity of the active site and by inhibitor/substrate binding. Novel insights regarding the observed stability differences as well as a potential proteolytic activity of wild-type alpha-tryptase, which may possess a cryptic active site, are discussed.

About this StructureAbout this Structure

2F9O is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

X-ray structures of free and leupeptin-complexed human alphaI-tryptase mutants: indication for an alpha-->beta-tryptase transition., Rohr KB, Selwood T, Marquardt U, Huber R, Schechter NM, Bode W, Than ME, J Mol Biol. 2006 Mar 17;357(1):195-209. Epub 2005 Dec 28. PMID:16414069 Page seeded by OCA on Sun May 4 03:38:04 2008

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