2bys: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:2bys.gif|left|200px]]
[[Image:2bys.gif|left|200px]]


{{Structure
<!--
|PDB= 2bys |SIZE=350|CAPTION= <scene name='initialview01'>2bys</scene>, resolution 2.05&Aring;
The line below this paragraph, containing "STRUCTURE_2bys", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=AC1:Lob+Binding+Site+For+Chain+J'>AC1</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=LOB:LOBELINE'>LOB</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=
-->
|DOMAIN=
{{STRUCTURE_2bys| PDB=2bys  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bys OCA], [http://www.ebi.ac.uk/pdbsum/2bys PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bys RCSB]</span>
}}


'''CRYSTAL STRUCTURE OF ACHBP FROM APLYSIA CALIFORNICA IN COMPLEX WITH LOBELINE'''
'''CRYSTAL STRUCTURE OF ACHBP FROM APLYSIA CALIFORNICA IN COMPLEX WITH LOBELINE'''
Line 31: Line 28:
[[Category: Sulzenbacher, G.]]
[[Category: Sulzenbacher, G.]]
[[Category: Taylor, P.]]
[[Category: Taylor, P.]]
[[Category: acetylcholine binding protein]]
[[Category: Acetylcholine binding protein]]
[[Category: conformational flexibility]]
[[Category: Conformational flexibility]]
[[Category: lobeline]]
[[Category: Lobeline]]
[[Category: nicotinic acetylcholine]]
[[Category: Nicotinic acetylcholine]]
[[Category: receptor]]
[[Category: Receptor]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 20:59:10 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:13:47 2008''

Revision as of 20:59, 3 May 2008

File:2bys.gif

Template:STRUCTURE 2bys

CRYSTAL STRUCTURE OF ACHBP FROM APLYSIA CALIFORNICA IN COMPLEX WITH LOBELINE


OverviewOverview

Upon ligand binding at the subunit interfaces, the extracellular domain of the nicotinic acetylcholine receptor undergoes conformational changes, and agonist binding allosterically triggers opening of the ion channel. The soluble acetylcholine-binding protein (AChBP) from snail has been shown to be a structural and functional surrogate of the ligand-binding domain (LBD) of the receptor. Yet, individual AChBP species display disparate affinities for nicotinic ligands. The crystal structure of AChBP from Aplysia californica in the apo form reveals a more open loop C and distinctive positions for other surface loops, compared with previous structures. Analysis of Aplysia AChBP complexes with nicotinic ligands shows that loop C, which does not significantly change conformation upon binding of the antagonist, methyllycaconitine, further opens to accommodate the peptidic antagonist, alpha-conotoxin ImI, but wraps around the agonists lobeline and epibatidine. The structures also reveal extended and nonoverlapping interaction surfaces for the two antagonists, outside the binding loci for agonists. This comprehensive set of structures reflects a dynamic template for delineating further conformational changes of the LBD of the nicotinic receptor.

About this StructureAbout this Structure

2BYS is a Single protein structure of sequence from Aplysia californica. Full crystallographic information is available from OCA.

ReferenceReference

Structures of Aplysia AChBP complexes with nicotinic agonists and antagonists reveal distinctive binding interfaces and conformations., Hansen SB, Sulzenbacher G, Huxford T, Marchot P, Taylor P, Bourne Y, EMBO J. 2005 Oct 19;24(20):3635-46. Epub 2005 Sep 29. PMID:16193063 Page seeded by OCA on Sat May 3 20:59:10 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA