2aj4: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:2aj4.gif|left|200px]]
[[Image:2aj4.gif|left|200px]]


{{Structure
<!--
|PDB= 2aj4 |SIZE=350|CAPTION= <scene name='initialview01'>2aj4</scene>, resolution 2.40&Aring;
The line below this paragraph, containing "STRUCTURE_2aj4", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Galactokinase Galactokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.6 2.7.1.6] </span>
or leave the SCENE parameter empty for the default display.
|GENE= GAL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
-->
|DOMAIN=
{{STRUCTURE_2aj4|  PDB=2aj4 |  SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aj4 OCA], [http://www.ebi.ac.uk/pdbsum/2aj4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2aj4 RCSB]</span>
}}


'''Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP'''
'''Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP'''
Line 31: Line 28:
[[Category: Thoden, J B.]]
[[Category: Thoden, J B.]]
[[Category: Timson, D J.]]
[[Category: Timson, D J.]]
[[Category: galactokinase]]
[[Category: Galactokinase]]
[[Category: galactosemia]]
[[Category: Galactosemia]]
[[Category: transcription]]
[[Category: Transcription]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 19:06:42 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:53:29 2008''

Revision as of 19:06, 3 May 2008

File:2aj4.gif

Template:STRUCTURE 2aj4

Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP


OverviewOverview

Gal1p of Saccharomyces cerevisiae is capable of performing two independent cellular functions. First, it is a key enzyme in the Leloir pathway for galactose metabolism where it catalyzes the conversion of alpha-d-galactose to galactose 1-phosphate. Second, it has the capacity to induce the transcription of the yeast GAL genes in response to the organism being challenged with galactose as the sole source of carbon. This latter function is normally performed by a highly related protein, Gal3p, but in its absence Gal1p can induce transcription, albeit inefficiently, both in vivo and in vitro. Here we report the x-ray structure of Gal1p in complex with alpha-d-galactose and Mg-adenosine 5'-(beta,gamma-imido)triphosphate (AMPPNP) determined to 2.4 Angstrom resolution. Overall, the enzyme displays a marked bilobal appearance with the active site being wedged between distinct N- and C-terminal domains. Despite being considerably larger than other galactokinases, Gal1p shares a similar molecular architecture with these enzymes as well as with other members of the GHMP superfamily. The extraordinary levels of similarity between Gal1p and Gal3p ( approximately 70% amino acid identity and approximately 90% similarity) have allowed a model for Gal3p to be constructed. By identifying the locations of mutations of Gal3p that result in altered transcriptional properties, we suggest potential models for Gal3p function and mechanisms for its interaction with the transcriptional inhibitor Gal80p. The GAL genetic switch has long been regarded as a paradigm for the control of gene expression in eukaryotes. Understanding the manner in which two of the proteins that function in transcriptional regulation interact with one another is an important step in determining the overall molecular mechanism of this switch.

About this StructureAbout this Structure

2AJ4 is a Single protein structure of sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

ReferenceReference

Molecular structure of Saccharomyces cerevisiae Gal1p, a bifunctional galactokinase and transcriptional inducer., Thoden JB, Sellick CA, Timson DJ, Reece RJ, Holden HM, J Biol Chem. 2005 Nov 4;280(44):36905-11. Epub 2005 Aug 22. PMID:16115868 Page seeded by OCA on Sat May 3 19:06:42 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA