2a9a: Difference between revisions

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[[Image:2a9a.gif|left|200px]]
[[Image:2a9a.gif|left|200px]]


{{Structure
<!--
|PDB= 2a9a |SIZE=350|CAPTION= <scene name='initialview01'>2a9a</scene>, resolution 2.003&Aring;
The line below this paragraph, containing "STRUCTURE_2a9a", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene>, <scene name='pdbligand=MTE:PHOSPHONIC+ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER'>MTE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span>
or leave the SCENE parameter empty for the default display.
|GENE= SUOX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 Gallus gallus])
-->
|DOMAIN=
{{STRUCTURE_2a9a|  PDB=2a9a |  SCENE= }}  
|RELATEDENTRY=[[2a99|2A99]], [[2a9b|2A9B]], [[2a9c|2A9C]], [[2a9d|2A9D]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a9a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a9a OCA], [http://www.ebi.ac.uk/pdbsum/2a9a PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a9a RCSB]</span>
}}


'''Crystal structure of recombinant chicken sulfite oxidase with the bound product, sulfate, at the active site'''
'''Crystal structure of recombinant chicken sulfite oxidase with the bound product, sulfate, at the active site'''
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[[Category: Wilson, H L.]]
[[Category: Wilson, H L.]]
[[Category: Xiang, S.]]
[[Category: Xiang, S.]]
[[Category: cso]]
[[Category: Cso]]
[[Category: molybdenum]]
[[Category: Molybdenum]]
[[Category: molybdopterin]]
[[Category: Molybdopterin]]
[[Category: sulfate]]
[[Category: Sulfate]]
[[Category: sulfite oxidase]]
[[Category: Sulfite oxidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 18:46:15 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:49:33 2008''

Revision as of 18:46, 3 May 2008

File:2a9a.gif

Template:STRUCTURE 2a9a

Crystal structure of recombinant chicken sulfite oxidase with the bound product, sulfate, at the active site


OverviewOverview

Sulfite oxidase deficiency is a lethal genetic disease that results from defects either in the genes encoding proteins involved in molybdenum cofactor biosynthesis or in the sulfite oxidase gene itself. Several point mutations in the sulfite oxidase gene have been identified from patients suffering from this disease worldwide. Although detailed biochemical analyses have been carried out on these mutations, no structural data could be obtained because of problems in crystallizing recombinant human and rat sulfite oxidases and the failure to clone the chicken sulfite oxidase gene. We synthesized the gene for chicken sulfite oxidase de novo, working backward from the amino acid sequence of the native chicken liver enzyme by PCR amplification of a series of 72 overlapping primers. The recombinant protein displayed the characteristic absorption spectrum of sulfite oxidase and exhibited steady state and rapid kinetic parameters comparable with those of the tissue-derived enzyme. We solved the crystal structures of the wild type and the sulfite oxidase deficiency-causing R138Q (R160Q in humans) variant of recombinant chicken sulfite oxidase in the resting and sulfate-bound forms. Significant alterations in the substrate-binding pocket were detected in the structure of the mutant, and a comparison between the wild type and mutant protein revealed that the active site residue Arg-450 adopts different conformations in the presence and absence of bound sulfate. The size of the binding pocket is thereby considerably reduced, and its position relative to the cofactor is shifted, causing an increase in the distance of the sulfur atom of the bound sulfate to the molybdenum.

About this StructureAbout this Structure

2A9A is a Single protein structure of sequence from Gallus gallus. Full crystallographic information is available from OCA.

ReferenceReference

Structural insights into sulfite oxidase deficiency., Karakas E, Wilson HL, Graf TN, Xiang S, Jaramillo-Busquets S, Rajagopalan KV, Kisker C, J Biol Chem. 2005 Sep 30;280(39):33506-15. Epub 2005 Jul 27. PMID:16048997 Page seeded by OCA on Sat May 3 18:46:15 2008

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