2a59: Difference between revisions

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[[Image:2a59.gif|left|200px]]
[[Image:2a59.gif|left|200px]]


{{Structure
<!--
|PDB= 2a59 |SIZE=350|CAPTION= <scene name='initialview01'>2a59</scene>, resolution 2.700&Aring;
The line below this paragraph, containing "STRUCTURE_2a59", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=LMZ:5-NITROSO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE'>LMZ</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Riboflavin_synthase Riboflavin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.9 2.5.1.9] </span>
or leave the SCENE parameter empty for the default display.
|GENE= rib4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4896 Schizosaccharomyces pombe])
-->
|DOMAIN=
{{STRUCTURE_2a59|  PDB=2a59 |  SCENE= }}  
|RELATEDENTRY=[[1kyy|1KYY]], [[2a57|2A57]], [[2a58|2A58]], [[1kyv|1KYV]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a59 OCA], [http://www.ebi.ac.uk/pdbsum/2a59 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a59 RCSB]</span>
}}


'''Structure of 6,7-Dimethyl-8-ribityllumazine synthase from Schizosaccharomyces pombe mutant W27Y with bound ligand 5-nitroso-6-ribitylamino-2,4(1H,3H)-pyrimidinedione'''
'''Structure of 6,7-Dimethyl-8-ribityllumazine synthase from Schizosaccharomyces pombe mutant W27Y with bound ligand 5-nitroso-6-ribitylamino-2,4(1H,3H)-pyrimidinedione'''
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[[Category: Koch, M.]]
[[Category: Koch, M.]]
[[Category: Weber, S.]]
[[Category: Weber, S.]]
[[Category: 5-nitroso-6-ribitylamino-2,4(1h,3h)-pyrimidinedione]]
[[Category: 6,7-dimethyl-8-ribityllumazine synthase]]
[[Category: 6,7-dimethyl-8-ribityllumazine synthase]]
[[Category: lusy]]
[[Category: Lusy]]
[[Category: mutant w27y]]
[[Category: Mutant w27y]]
[[Category: schizosaccharomyces pombe]]
[[Category: Schizosaccharomyces pombe]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 18:37:23 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:48:00 2008''

Revision as of 18:37, 3 May 2008

File:2a59.gif

Template:STRUCTURE 2a59

Structure of 6,7-Dimethyl-8-ribityllumazine synthase from Schizosaccharomyces pombe mutant W27Y with bound ligand 5-nitroso-6-ribitylamino-2,4(1H,3H)-pyrimidinedione


OverviewOverview

The amino acid residue tryptophan 27 of 6,7-dimethyl-8-ribityllumazine synthase of the yeast Schizosaccharomyces pombe was replaced by tyrosine. The structures of the W27Y mutant protein in complex with riboflavin, the substrate analogue 5-nitroso-6-ribitylamino-2,4(1H,3H)-pyrimidinedione, and the product analogue 6-carboxyethyl-7-oxo-8-ribityllumazine, were determined by X-ray crystallography at resolutions of 2.7-2.8 A. Whereas the indole system of W27 forms a coplanar pi-complex with riboflavin, the corresponding phenyl ring in the W27Y mutant establishes only peripheral contact with the heterocyclic ring system of the bound riboflavin. These findings provide an explanation for the absence of the long wavelength shift in optical absorption spectra of riboflavin bound to the mutant enzyme. The structures of the mutants are important tools for the interpretation of the unusual physical properties of riboflavin in complex with lumazine synthase.

About this StructureAbout this Structure

2A59 is a Single protein structure of sequence from Schizosaccharomyces pombe. Full crystallographic information is available from OCA.

ReferenceReference

Structural basis of charge transfer complex formation by riboflavin bound to 6,7-dimethyl-8-ribityllumazine synthase., Koch M, Breithaupt C, GerhardtHaase S, Weber S, Cushman M, Huber R, Bacher A, Fischer M, Eur J Biochem. 2004 Aug;271(15):3208-14. PMID:15265040 Page seeded by OCA on Sat May 3 18:37:23 2008

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