2a39: Difference between revisions

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[[Image:2a39.jpg|left|200px]]
[[Image:2a39.jpg|left|200px]]


{{Structure
<!--
|PDB= 2a39 |SIZE=350|CAPTION= <scene name='initialview01'>2a39</scene>, resolution 2.2&Aring;
The line below this paragraph, containing "STRUCTURE_2a39", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=ACI:Catalytic+Acid/Base'>ACI</scene> and <scene name='pdbsite=NUC:Catalytic+Nucleophile+As+Identified+By+2-Fluorocellobios+...'>NUC</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span>
or leave the SCENE parameter empty for the default display.
|GENE= POTENTIAL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=34413 Humicola insolens])
-->
|DOMAIN=
{{STRUCTURE_2a39|  PDB=2a39 |  SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a39 OCA], [http://www.ebi.ac.uk/pdbsum/2a39 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a39 RCSB]</span>
}}


'''HUMICOLA INSOLENS ENDOCELLULASE EGI NATIVE STRUCTURE'''
'''HUMICOLA INSOLENS ENDOCELLULASE EGI NATIVE STRUCTURE'''
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[[Category: Withers, S G.]]
[[Category: Withers, S G.]]
[[Category: Woldike, H F.]]
[[Category: Woldike, H F.]]
[[Category: cellulase]]
[[Category: Cellulase]]
[[Category: cellulose degradation]]
[[Category: Cellulose degradation]]
[[Category: endoglucanase]]
[[Category: Endoglucanase]]
[[Category: glycoside hydrolase family 7]]
[[Category: Glycoside hydrolase family 7]]
[[Category: glycosylated protein]]
[[Category: Glycosylated protein]]
[[Category: hydrolase]]
[[Category: Hydrolase]]
 
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:47:16 2008''

Revision as of 18:32, 3 May 2008

File:2a39.jpg

Template:STRUCTURE 2a39

HUMICOLA INSOLENS ENDOCELLULASE EGI NATIVE STRUCTURE


OverviewOverview

Cellulose is the major polysaccharide component of the plant cell wall and the most abundant naturally produced macromolecule on Earth. The enzymic degradation of cellulose, by cellulases, is therefore of great environmental and commercial significance. Cellulases are found in 12 of the glycoside hydrolase families classified according to their amino acid sequence similarities. Endoglucanase I (Cel7B), from the soft-rot fungus Humicola insolens, is a family 7 enzyme. The structure of the native form of Cel7B from H. insolens at 2.2 A resolution has been solved by molecular replacement using the known Trichoderma reesei cellobiohydrolase I [Divne, Stahlberg, Reinikainen, Ruohonen, Pettersson, Knowles, Teeri and Jones (1994) Science 265, 524-528] structure as the search model. Cel7B catalyses hydrolysis of the beta-1,4 glycosidic linkages in cellulose with net retention of anomeric configuration. The catalytic nucleophile at the active site of Cel7B has been identified as Glu-197 by trapping of a 2-deoxy-2-fluorocellotriosyl enzyme intermediate and identification of the labelled peptide in peptic digests by tandem MS. Site-directed mutagenesis of both Glu-197 and the prospective catalytic acid, Glu-202, results in inactive enzyme, confirming the critical role of these groups for catalysis.

About this StructureAbout this Structure

2A39 is a Single protein structure of sequence from Humicola insolens. Full crystallographic information is available from OCA.

ReferenceReference

Crystal structure of the family 7 endoglucanase I (Cel7B) from Humicola insolens at 2.2 A resolution and identification of the catalytic nucleophile by trapping of the covalent glycosyl-enzyme intermediate., MacKenzie LF, Sulzenbacher G, Divne C, Jones TA, Woldike HF, Schulein M, Withers SG, Davies GJ, Biochem J. 1998 Oct 15;335 ( Pt 2):409-16. PMID:9761741 Page seeded by OCA on Sat May 3 18:32:50 2008

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