1yb9: Difference between revisions

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[[Image:1yb9.gif|left|200px]]
[[Image:1yb9.gif|left|200px]]


{{Structure
<!--
|PDB= 1yb9 |SIZE=350|CAPTION= <scene name='initialview01'>1yb9</scene>, resolution 1.65&Aring;
The line below this paragraph, containing "STRUCTURE_1yb9", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=2OT:2&#39;-O-[2-(N,N-DIMETHYLAMINOOXY)ETHYL]+THYMIDINE-5&#39;-MONOPHOSPHATE'>2OT</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene>
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|ACTIVITY=  
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_1yb9| PDB=1yb9  | SCENE= }}  
|RELATEDENTRY=[[1y7f|1Y7F]], [[1y84|1Y84]], [[1y86|1Y86]], [[1y8l|1Y8L]], [[1y8v|1Y8V]], [[1wv5|1WV5]], [[1wv6|1WV6]], [[1y9f|1Y9F]], [[1y9s|1Y9S]], [[1ybc|1YBC]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb9 OCA], [http://www.ebi.ac.uk/pdbsum/1yb9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yb9 RCSB]</span>
}}


'''Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)'''
'''Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)'''
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==About this Structure==
==About this Structure==
1YB9 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB9 OCA].  
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB9 OCA].  


==Reference==
==Reference==
Probing the influence of stereoelectronic effects on the biophysical properties of oligonucleotides: comprehensive analysis of the RNA affinity, nuclease resistance, and crystal structure of ten 2'-O-ribonucleic acid modifications., Egli M, Minasov G, Tereshko V, Pallan PS, Teplova M, Inamati GB, Lesnik EA, Owens SR, Ross BS, Prakash TP, Manoharan M, Biochemistry. 2005 Jun 28;44(25):9045-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15966728 15966728]
Probing the influence of stereoelectronic effects on the biophysical properties of oligonucleotides: comprehensive analysis of the RNA affinity, nuclease resistance, and crystal structure of ten 2'-O-ribonucleic acid modifications., Egli M, Minasov G, Tereshko V, Pallan PS, Teplova M, Inamati GB, Lesnik EA, Owens SR, Ross BS, Prakash TP, Manoharan M, Biochemistry. 2005 Jun 28;44(25):9045-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15966728 15966728]
[[Category: Protein complex]]
[[Category: Egli, M.]]
[[Category: Egli, M.]]
[[Category: Inamati, G B.]]
[[Category: Inamati, G B.]]
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[[Category: Teplova, M.]]
[[Category: Teplova, M.]]
[[Category: Tereshko, V.]]
[[Category: Tereshko, V.]]
[[Category: a-dna]]
[[Category: A-dna]]
[[Category: crystal structure]]
[[Category: Crystal structure]]
[[Category: decamer]]
[[Category: Decamer]]
[[Category: o2'-modification]]
[[Category: O2'-modification]]
 
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