1x8o: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1x8o.gif|left|200px]]
[[Image:1x8o.gif|left|200px]]


{{Structure
<!--
|PDB= 1x8o |SIZE=350|CAPTION= <scene name='initialview01'>1x8o</scene>, resolution 1.01&Aring;
The line below this paragraph, containing "STRUCTURE_1x8o", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO:NITROGEN+OXIDE'>NO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE=
-->
|DOMAIN=
{{STRUCTURE_1x8o| PDB=1x8o  | SCENE= }}  
|RELATEDENTRY=[[1koi|1KOI]], [[1erx|1ERX]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1x8o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x8o OCA], [http://www.ebi.ac.uk/pdbsum/1x8o PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1x8o RCSB]</span>
}}


'''1.01 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6'''
'''1.01 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6'''
Line 29: Line 26:
[[Category: Roberts, S A.]]
[[Category: Roberts, S A.]]
[[Category: Weichsel, A.]]
[[Category: Weichsel, A.]]
[[Category: beta barrel]]
[[Category: Beta barrel]]
[[Category: heme]]
[[Category: Heme]]
[[Category: lipocalin]]
[[Category: Lipocalin]]
[[Category: nitric oxide]]
[[Category: Nitric oxide]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 14:42:31 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:46:12 2008''

Revision as of 14:42, 3 May 2008

File:1x8o.gif

Template:STRUCTURE 1x8o

1.01 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6


OverviewOverview

The blood-sucking insect Rhodnius prolixus uses nitrophorin 4, a heme protein, to deliver nitric oxide (NO) to a victim, causing vasodilation and improved feeding. Binding of NO occurs at a ferric heme and is modulated by pH. NO binding at lower pH induces a large conformational change involving loops A-B and G-H that leads to distal pocket desolvation and protection of the nitrosyl heme complex. We have determined the crystal structures of Rhodnius nitrophorin 4 to ultrahigh resolution in four functional states: +/-NO at pH = 7.4 and +/-NO at pH = 5.6. The structure with NO at pH 7.4 (1.08 A) is newly determined while the other complexes have been modeled to resolutions much greater than previously reported (1.0-0.85 A). The ultrahigh resolution allowed us to resolve multiple conformers in binding-site loops, leading to a detailed description of the dynamics involved with storing NO in the insect salivary gland at low pH, and releasing NO in response to the increased pH of a victim's tissue. Strikingly, features for both the "open" and "closed" conformers exist under all conditions, suggesting that the flexible loops can transition with relative ease between conformational states. Yet, release of NO from rNP4 is much slower than found for other ferric heme proteins. The structures suggest that highly mobile loops can limit diffusion of diatomic molecules into and out of a protein cavity, a result with implications for the role of protein dynamics in function.

About this StructureAbout this Structure

1X8O is a Single protein structure of sequence from Rhodnius prolixus. Full crystallographic information is available from OCA.

ReferenceReference

Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding., Kondrashov DA, Roberts SA, Weichsel A, Montfort WR, Biochemistry. 2004 Nov 2;43(43):13637-47. PMID:15504026 Page seeded by OCA on Sat May 3 14:42:31 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA