8xnh: Difference between revisions

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-'''Unreleased structure'''
-The entry 8xnh is ON HOLD  until Paper Publication
+==Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8==
+<StructureSection load='8xnh' size='340' side='right'caption='[[8xnh]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-Authors: Fan, P.F., Ren, Y., Yu, C.M., Chen, W.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8xnh]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Henipavirus_nipahense Henipavirus nipahense] and [https://en.wikipedia.org/wiki/Macaca Macaca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XNH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8XNH FirstGlance]. <br>
-Description: Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-[[Category: Yu, C.M]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8xnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xnh OCA], [https://pdbe.org/8xnh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xnh RCSB], [https://www.ebi.ac.uk/pdbsum/8xnh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xnh ProSAT]</span></td></tr>
-[[Category: Fan, P.F]]
+</table>
-[[Category: Ren, Y]]
+== Function ==
-[[Category: Chen, W]]
+[https://www.uniprot.org/uniprot/FUS_NIPAV FUS_NIPAV] Class I viral fusion protein. Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and plasma cell membrane fusion, the heptad repeat (HR) regions assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and plasma cell membranes. Directs fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm. This fusion is pH independent and occurs directly at the outer cell membrane. The trimer of F1-F2 (F protein) probably interacts with HN at the virion surface. Upon HN binding to its cellular receptor, the hydrophobic fusion peptide is unmasked and interacts with the cellular membrane, inducing the fusion between cell and virion membranes. Later in infection, F proteins expressed at the plasma membrane of infected cells could mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis (By similarity).
+__TOC__
+</StructureSection>
+[[Category: Henipavirus nipahense]]
+[[Category: Large Structures]]
+[[Category: Macaca]]
+[[Category: Chen W]]
+[[Category: Fan PF]]
+[[Category: Ren Y]]
+[[Category: Yu CM]]