6-phosphogluconate dehydrogenase 3D structures: Difference between revisions

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Line 9: Line 9:
**[[2pgd]] - s6PDH – sheep
**[[2pgd]] - s6PDH – sheep
**[[2p4q]] - 6PDH – yeast
**[[2p4q]] - 6PDH – yeast
**[[2zyg]] - 6PDH (mutant) – Klebsiella pneumonia
**[[2zyg]] - 6PDH (mutant) – ''Klebsiella pneumonia''
**[[1pgj]] - 6PDH – Trypanosoma brucei  
**[[1pgj]] - 6PDH – ''Trypanosoma brucei''


**[[7cb0]], [[7cb6]] - Sa6PDH – Staphylococcus aureus<br />
**[[7cb0]], [[7cb6]] - Sa6PDH – ''Staphylococcus aureus''<br />
**[[8i4n]] – 6PDH – Corynebacterium glutamicum<br />
**[[8i4n]] – 6PDH – ''Corynebacterium glutamicum''<br />


*6PDH binary complex
*6PDH binary complex
Line 24: Line 24:
**[[1pgp]] - s6PDH + 6PG
**[[1pgp]] - s6PDH + 6PG
**[[1pgq]] - s6PDH + AMP
**[[1pgq]] - s6PDH + AMP
**[[6fqz]] - Pf6PDH + 6PG – Plasmodium falciparum<br />
**[[6fqz]] - Pf6PDH + 6PG – ''Plasmodium falciparum''<br />
**[[6fqy]] - Pf6PDH + NADP <br />
**[[6fqy]] - Pf6PDH + NADP <br />
**[[2zya]] - Ec6PDH (mutant) + 6PG – Escherichia coli
**[[2zya]] - Ec6PDH (mutant) + 6PG – ''Escherichia coli''
**[[2zyd]] - Ec6PDH (mutant) + glucose
**[[2zyd]] - Ec6PDH (mutant) + glucose
**[[2w8z]], [[2w90]] - 6PDH + 6PG – Geobacillus stearothermophilus
**[[2w8z]], [[2w90]] - 6PDH + 6PG – ''Geobacillus stearothermophilus''
**[[2iyo]] - Ll6PDH + 6PG – Lactococcus lactis
**[[2iyo]] - Ll6PDH + 6PG – ''Lactococcus lactis''
**[[7cb5]] - Sa6PDH + 6PG <br />
**[[7cb5]] - Sa6PDH + 6PG <br />
**[[7cb2]] - Sa6PDH + NADP <br />
**[[7cb2]] - Sa6PDH + NADP <br />
**[[8c79]] - 6PDH + NADP – Leishmania donovani<br />
**[[8c79]] - 6PDH + NADP – ''Leishmania donovani''<br />


*6PDH ternary complex
*6PDH ternary complex
Line 47: Line 47:
*6PDH NAD-binding domain (imine reductase) 1-310
*6PDH NAD-binding domain (imine reductase) 1-310


**[[7wxe]], [[8kfk]] – IR – Paenibacillus mucilaginosus<br />
**[[7wxe]], [[8kfk]] – IR – ''Paenibacillus mucilaginosus''<br />
**[[9ijb]] – IR – Mycobacterium tuberculosis<br />
**[[9ijb]] – IR – ''Mycobacterium tuberculosis''<br />
**[[4e21]] - GmIR – Geobacter metallireducens
**[[4e21]] - GmIR – ''Geobacter metallireducens''
**[[4gbj]] – DfIR – Dyadobacter fermentans<br />
**[[4gbj]] – DfIR – ''Dyadobacter fermentans''<br />
**[[6xeq]] – 6PDH – Gluconbacter oxydans<br />  
**[[6xeq]] – 6PDH – ''Gluconbacter oxydans''<br />  
**[[6vpb]] – 6PDH – Gluconacetobacter diazotrophicus<br />  
**[[6vpb]] – 6PDH – ''Gluconacetobacter diazotrophicus''<br />  


*Imine reductase binary complex
*Imine reductase binary complex


**[[6jiz]] - SnIR+ NADP – Stackerbrandita nassauensis <br />
**[[6jiz]] - SnIR+ NADP – ''Stackerbrandita nassauensis'' <br />
**[[6smt]] - 6PDH + NADP – Mycolicibacterium smegmatis<br />
**[[6smt]] - 6PDH + NADP – ''Mycolicibacterium smegmatis''<br />
**[[7osn]] - 6PDH + NADP – Micromonospora<br />
**[[7osn]] - 6PDH + NADP – ''Micromonospora''<br />


*Imine reductase ternary complex
*Imine reductase ternary complex


**[[3pef]] – GmIR (mutant) + NADP + monophosphoadenosine diphosphoribose<br />
**[[3pef]] – GmIR (mutant) + NADP + monophosphoadenosine diphosphoribose<br />
**[[3w6u]] – Pc6PDH + NADP + monophosphoadenosine diphosphoribose – Pyrobaculum calidifontis<br />
**[[3w6u]] – Pc6PDH + NADP + monophosphoadenosine diphosphoribose – ''Pyrobaculum calidifontis''<br />
**[[3w6z]] – Pc6PDH (mutant) + NADP + monophosphoadenosine diphosphoribose <br />
**[[3w6z]] – Pc6PDH (mutant) + NADP + monophosphoadenosine diphosphoribose <br />
**[[5u5g]] - 6PDH + NADP + 2-oxopropyl phosphonate – Pseudomonas syringae<br />
**[[5u5g]] - 6PDH + NADP + 2-oxopropyl phosphonate – ''Pseudomonas syringae''<br />
**[[6jit]] - Sn6PDH + NADP + quinoline derivative<br />
**[[6jit]] - Sn6PDH + NADP + quinoline derivative<br />


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Michal Harel