6dnu: Difference between revisions

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 ==Crystal Structure of Neisseria meningitidis DsbD c-terminal domain in the oxidised form==
-<StructureSection load='6dnu' size='340' side='right' caption='[[6dnu]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
+<StructureSection load='6dnu' size='340' side='right'caption='[[6dnu]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6dnu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Neiml Neiml]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DNU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DNU FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6dnu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_alpha14 Neisseria meningitidis alpha14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DNU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DNU FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.283&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dsbD, NMO_1340 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=662598 NEIML])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-disulfide_reductase Protein-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.8 1.8.1.8] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dnu OCA], [https://pdbe.org/6dnu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dnu RCSB], [https://www.ebi.ac.uk/pdbsum/6dnu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dnu ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dnu OCA], [http://pdbe.org/6dnu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dnu RCSB], [http://www.ebi.ac.uk/pdbsum/6dnu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dnu ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/C6S7X6_NEIML C6S7X6_NEIML]] Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps.[HAMAP-Rule:MF_00399]
+[https://www.uniprot.org/uniprot/C6S7X6_NEIML C6S7X6_NEIML] Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps.[HAMAP-Rule:MF_00399]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 21: @@
 ==See Also==
-*[[Thiol:disulfide interchange protein|Thiol:disulfide interchange protein]]
+*[[Thiol:disulfide interchange protein 3D structures|Thiol:disulfide interchange protein 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Neiml]]
+[[Category: Large Structures]]
-[[Category: Protein-disulfide reductase]]
+[[Category: Neisseria meningitidis alpha14]]
-[[Category: Heras, B]]
+[[Category: Heras B]]
-[[Category: Paxman, J J]]
+[[Category: Paxman JJ]]
-[[Category: Smith, R P]]
+[[Category: Smith RP]]
-[[Category: Disulphide reductase]]
-[[Category: Dsb protein]]
-[[Category: Oxidoreductase]]