6d2y: Difference between revisions

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<StructureSection load='6d2y' size='340' side='right'caption='[[6d2y]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
<StructureSection load='6d2y' size='340' side='right'caption='[[6d2y]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6d2y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Prevotella_bryantii_b14 Prevotella bryantii b14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D2Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6D2Y FirstGlance]. <br>
<table><tr><td colspan='2'>[[6d2y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prevotella_bryantii_B14 Prevotella bryantii B14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D2Y FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.19&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PBR_0365 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=752555 Prevotella bryantii B14])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d2y OCA], [https://pdbe.org/6d2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d2y RCSB], [https://www.ebi.ac.uk/pdbsum/6d2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d2y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6d2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d2y OCA], [http://pdbe.org/6d2y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6d2y RCSB], [http://www.ebi.ac.uk/pdbsum/6d2y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6d2y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D8DY16_9BACT D8DY16_9BACT]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Prevotella bryantii b14]]
[[Category: Prevotella bryantii B14]]
[[Category: Brumer, H]]
[[Category: Brumer H]]
[[Category: Leo, R Di]]
[[Category: Di Leo R]]
[[Category: McGregor, N]]
[[Category: McGregor N]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Skarina, T]]
[[Category: Skarina T]]
[[Category: Stogios, P J]]
[[Category: Stogios PJ]]
[[Category: Wawrzak, Z]]
[[Category: Wawrzak Z]]
[[Category: Beta sandwich]]
[[Category: Polysaccharide utilization locus]]
[[Category: Prevotella bryantii]]
[[Category: Sugar binding protein]]
[[Category: Surface glycan binding protein]]

Latest revision as of 14:05, 30 October 2024

Crystal structure of surface glycan-binding protein PbSGBP-B from Prevotella bryantiiCrystal structure of surface glycan-binding protein PbSGBP-B from Prevotella bryantii

Structural highlights

6d2y is a 1 chain structure with sequence from Prevotella bryantii B14. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.19Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

D8DY16_9BACT

6d2y, resolution 2.19Å

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OCA