3lof: Difference between revisions

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 ==C-terminal domain of human heat shock 70kDa protein 1B.==
-<StructureSection load='3lof' size='340' side='right' caption='[[3lof]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='3lof' size='340' side='right'caption='[[3lof]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3lof]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LOF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3lof]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LOF FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HSPA1, HSPA1A, HSPA1B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lof OCA], [http://pdbe.org/3lof PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lof RCSB], [http://www.ebi.ac.uk/pdbsum/3lof PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lof ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lof FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lof OCA], [https://pdbe.org/3lof PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lof RCSB], [https://www.ebi.ac.uk/pdbsum/3lof PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lof ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/HS71A_HUMAN HS71A_HUMAN] In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage. In case of rotavirus A infection, serves as a post-attachment receptor for the virus to facilitate entry into the cell. Essential for STUB1-mediated ubiquitination and degradation of FOXP3 in regulatory T-cells (Treg) during inflammation (PubMed:23973223).<ref>PMID:16537599</ref> <ref>PMID:22528486</ref> <ref>PMID:23973223</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3lof_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3lof_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
 </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lof ConSurf].
 <div style="clear:both"></div>
+==See Also==
+*[[Heat Shock Protein structures|Heat Shock Protein structures]]
+== References ==
+<references/>
 __TOC__
 </StructureSection>
-[[Category: Human]]
+[[Category: Homo sapiens]]
-[[Category: Gu, M]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A]]
+[[Category: Gu M]]
-[[Category: Structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Mihelic, M]]
+[[Category: Mihelic M]]
-[[Category: Morimoto, R I]]
+[[Category: Morimoto RI]]
-[[Category: Orton, K]]
+[[Category: Orton K]]
-[[Category: Osipiuk, J]]
+[[Category: Osipiuk J]]
-[[Category: Atp-binding]]
-[[Category: Chaperone]]
-[[Category: Heat shock]]
-[[Category: Hsp70]]
-[[Category: Hspa1b]]
-[[Category: Mcsg]]
-[[Category: Nucleotide-binding]]
-[[Category: Phosphoprotein]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Stress response]]