2wc9: Difference between revisions
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<StructureSection load='2wc9' size='340' side='right'caption='[[2wc9]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='2wc9' size='340' side='right'caption='[[2wc9]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2wc9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WC9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WC9 FirstGlance]. <br> | <table><tr><td colspan='2'>[[2wc9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_phage_SPP1 Bacillus phage SPP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WC9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WC9 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wc9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wc9 OCA], [https://pdbe.org/2wc9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wc9 RCSB], [https://www.ebi.ac.uk/pdbsum/2wc9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wc9 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wc9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wc9 OCA], [https://pdbe.org/2wc9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wc9 RCSB], [https://www.ebi.ac.uk/pdbsum/2wc9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wc9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/TERL_BPSPP TERL_BPSPP] Component of the molecular motor that translocates genomic DNA in empty capsid during DNA packaging. Heterodimerizes with small terminase protein to be docked on capsid portal protein. The latter forms a ring in which genomic DNA in translocated into the capsid. May have or induce an endonuclease activity to cleave the genome concatemer after encapsidation (By similarity). | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wc/2wc9_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wc/2wc9_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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==See Also== | ==See Also== | ||
*[[Terminase|Terminase]] | *[[Terminase 3D Structures|Terminase 3D Structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus phage SPP1]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Alonso | [[Category: Alonso JC]] | ||
[[Category: Antson | [[Category: Antson AA]] | ||
[[Category: Chechik | [[Category: Chechik M]] | ||
[[Category: Foster | [[Category: Foster AW]] | ||
[[Category: Kovalevskiy | [[Category: Kovalevskiy OV]] | ||
[[Category: Shevtsov | [[Category: Shevtsov MB]] | ||
[[Category: Smits | [[Category: Smits C]] | ||