2fdr: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1o03|1o03]], [[2ah5|2ah5]], [[1fez|1fez]]</div></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
</table>
</table>
Line 14: Line 13:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 21: Line 20:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrt5]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Edwards, A]]
[[Category: Edwards A]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Nocek B]]
[[Category: Nocek, B]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Xu X]]
[[Category: Xu, X]]
[[Category: Zheng H]]
[[Category: Zheng, H]]
[[Category: Agrobacterium tumefacien]]
[[Category: Conserved hypothetical]]
[[Category: Had-superfamily hydrolase]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Putative b-phosphoglucomutase]]
[[Category: Sad]]
[[Category: Unknown function]]

Latest revision as of 03:55, 21 November 2024

Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58

Structural highlights

2fdr is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fdr, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2fdr&oldid=4204298"