2qyb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='2qyb' size='340' side='right'caption='[[2qyb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='2qyb' size='340' side='right'caption='[[2qyb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2qyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geosl Geosl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYB FirstGlance]. <br>
<table><tr><td colspan='2'>[[2qyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYB FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU1429 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243231 GEOSL])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyb OCA], [https://pdbe.org/2qyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyb RCSB], [https://www.ebi.ac.uk/pdbsum/2qyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyb ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyb TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyb OCA], [https://pdbe.org/2qyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyb RCSB], [https://www.ebi.ac.uk/pdbsum/2qyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyb ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyb TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q74D90_GEOSL Q74D90_GEOSL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyb_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyb_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Geosl]]
[[Category: Geobacter sulfurreducens PCA]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Clancy, S]]
[[Category: Clancy S]]
[[Category: Duggan, E]]
[[Category: Duggan E]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Nocek B]]
[[Category: Nocek, B]]
[[Category: Domain of putative membrane protein]]
[[Category: Gaf domain]]
[[Category: Mcsg]]
[[Category: Membrane protein]]
[[Category: PSI, Protein structure initiative]]

Latest revision as of 08:28, 17 October 2024

Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCACrystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA

Structural highlights

2qyb is a 1 chain structure with sequence from Geobacter sulfurreducens PCA. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q74D90_GEOSL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2qyb, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2qyb&oldid=4192251"