2ql0: Difference between revisions

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==Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris==
==Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris==
<StructureSection load='2ql0' size='340' side='right'caption='[[2ql0]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2ql0' size='340' side='right'caption='[[2ql0]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ql0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QL0 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ql0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QL0 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[8rxn|8rxn]], [[2qkz|2qkz]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rub ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=881 Desulfovibrio vulgaris])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ql0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ql0 OCA], [https://pdbe.org/2ql0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ql0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ql0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ql0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ql0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ql0 OCA], [https://pdbe.org/2ql0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ql0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ql0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ql0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH]] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.  Electron acceptor for cytoplasmic lactate dehydrogenase.  
[https://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.  Electron acceptor for cytoplasmic lactate dehydrogenase.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ql0 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ql0 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Desulfovibrio vulgaris]]
[[Category: Desulfovibrio vulgaris]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Duarte, I C]]
[[Category: Duarte IC]]
[[Category: Goodfellow, B J]]
[[Category: Goodfellow BJ]]
[[Category: Macedo, A L]]
[[Category: Macedo AL]]
[[Category: Markley, J L]]
[[Category: Markley JL]]
[[Category: Moura, I]]
[[Category: Moura I]]
[[Category: Moura, J G]]
[[Category: Moura JG]]
[[Category: Nunes, S G]]
[[Category: Nunes SG]]
[[Category: Volkman, B F]]
[[Category: Volkman BF]]
[[Category: Electron transport]]
[[Category: Iron]]
[[Category: Metal-binding]]

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