1wf9: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
Line 1: Line 1:


==Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)==
==Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)==
<StructureSection load='1wf9' size='340' side='right'caption='[[1wf9]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1wf9' size='340' side='right'caption='[[1wf9]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1wf9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WF9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WF9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1wf9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WF9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WF9 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN RAFL09-18-B15 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wf9 OCA], [https://pdbe.org/1wf9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wf9 RCSB], [https://www.ebi.ac.uk/pdbsum/1wf9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wf9 ProSAT], [https://www.topsan.org/Proteins/RSGI/1wf9 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wf9 OCA], [https://pdbe.org/1wf9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wf9 RCSB], [https://www.ebi.ac.uk/pdbsum/1wf9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wf9 ProSAT], [https://www.topsan.org/Proteins/RSGI/1wf9 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/NPL41_ARATH NPL41_ARATH]] May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (By similarity).  
[https://www.uniprot.org/uniprot/NPL41_ARATH NPL41_ARATH] May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Hayashi, F]]
[[Category: Hayashi F]]
[[Category: Qin, X]]
[[Category: Qin X]]
[[Category: Structural genomic]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S]]
[[Category: Arabidopsis thaliana]]
[[Category: Beta-grasp fold like domain]]
[[Category: Hypothetical protein]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Rsgi]]
[[Category: Unknown function]]

Latest revision as of 16:36, 9 May 2024

Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)Solution structure of a novel beta-grasp fold like domain of Hypothetical protein (Arabidopsis thaliana)

Structural highlights

1wf9 is a 1 chain structure with sequence from Arabidopsis thaliana. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

NPL41_ARATH May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA