1s13: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1s13.gif|left|200px]]
[[Image:1s13.gif|left|200px]]


{{Structure
<!--
|PDB= 1s13 |SIZE=350|CAPTION= <scene name='initialview01'>1s13</scene>, resolution 2.29&Aring;
The line below this paragraph, containing "STRUCTURE_1s13", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=2FH:2-PHENYLHEME'>2FH</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span>
or leave the SCENE parameter empty for the default display.
|GENE= HMOX1 or HO1 or HO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1s13| PDB=1s13  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1s13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s13 OCA], [http://www.ebi.ac.uk/pdbsum/1s13 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1s13 RCSB]</span>
}}


'''Human Heme Oxygenase Oxidatition of alpha- and gamma-meso-Phenylhemes'''
'''Human Heme Oxygenase Oxidatition of alpha- and gamma-meso-Phenylhemes'''
Line 32: Line 29:
[[Category: Poulos, T L.]]
[[Category: Poulos, T L.]]
[[Category: Wang, J.]]
[[Category: Wang, J.]]
[[Category: heme degredation]]
[[Category: Heme degredation]]
[[Category: heme oxyhenase-1]]
[[Category: Heme oxyhenase-1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 08:09:42 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:35:53 2008''

Revision as of 08:09, 3 May 2008

File:1s13.gif

Template:STRUCTURE 1s13

Human Heme Oxygenase Oxidatition of alpha- and gamma-meso-Phenylhemes


OverviewOverview

Human heme oxygenase-1 (hHO-1) catalyzes the O2-dependent oxidation of heme to biliverdin, CO, and free iron. Previous work indicated that electrophilic addition of the terminal oxygen of the ferric hydroperoxo complex to the alpha-meso-carbon gives 5-hydroxyheme. Earlier efforts to block this reaction with a 5-methyl substituent failed, as the reaction still gave biliverdin IXalpha. Surprisingly, a 15-methyl substituent caused exclusive cleavage at the gamma-meso-rather than at the normal, unsubstituted alpha-meso-carbon. No CO was formed in these reactions, but the fragment cleaved from the porphyrin eluded identification. We report here that hHO-1 cleaves 5-phenylheme to biliverdin IXalpha and oxidizes 15-phenylheme at the alpha-meso position to give 10-phenylbiliverdin IXalpha. The fragment extruded in the oxidation of 5-phenylheme is benzoic acid, one oxygen of which comes from O2 and the other from water. The 2.29- and 2.11-A crystal structures of the hHO-1 complexes with 1- and 15-phenylheme, respectively, show clear electron density for both the 5- and 15-phenyl rings in both molecules of the asymmetric unit. The overall structure of 15-phenylheme-hHO-1 is similar to that of heme-hHO-1 except for small changes in distal residues 141-150 and in the proximal Lys18 and Lys22. In the 5-phenylheme-hHO-1 structure, the phenyl-substituted heme occupies the same position as heme in the heme-HO-1 complex but the 5-phenyl substituent disrupts the rigid hydrophobic wall of residues Met34, Phe214, and residues 26-42 near the alpha-meso carbon. The results provide independent support for an electrophilic oxidation mechanism and support a role for stereochemical control of the reaction regiospecificity.

About this StructureAbout this Structure

1S13 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Human heme oxygenase oxidation of 5- and 15-phenylhemes., Wang J, Niemevz F, Lad L, Huang L, Alvarez DE, Buldain G, Poulos TL, de Montellano PR, J Biol Chem. 2004 Oct 8;279(41):42593-604. Epub 2004 Aug 5. PMID:15297453 Page seeded by OCA on Sat May 3 08:09:42 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA