4afb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='4afb' size='340' side='right'caption='[[4afb]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='4afb' size='340' side='right'caption='[[4afb]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4afb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_2001 Atcc 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AFB FirstGlance]. <br>
<table><tr><td colspan='2'>[[4afb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_glabrata Candida glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AFB FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4a3x|4a3x]], [[4af9|4af9]], [[4afa|4afa]], [[4afc|4afc]], [[4asl|4asl]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4afb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4afb OCA], [https://pdbe.org/4afb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4afb RCSB], [https://www.ebi.ac.uk/pdbsum/4afb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4afb ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4afb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4afb OCA], [https://pdbe.org/4afb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4afb RCSB], [https://www.ebi.ac.uk/pdbsum/4afb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4afb ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
== Function ==
== Publication Abstract from PubMed ==
[https://www.uniprot.org/uniprot/Q6VBJ0_CANGB Q6VBJ0_CANGB]
The human pathogenic yeast Candida glabrata harbors more than 20 surface-exposed, epithelial adhesins (Epas) for host cell adhesion. The Epa family recognizes host glycans and discriminates between target tissues by their adhesin (A) domains, but a detailed structural basis for ligand-binding specificity of Epa proteins has been lacking so far. In this study, we provide high-resolution crystal structures of the Epa1A domain in complex with different carbohydrate ligands that reveal how host cell mucin-type O-glycans are recognized and allow a structure-guided classification of the Epa family into specific subtypes. Further detailed structural and functional characterization of subtype-switched Epa1 variants shows that specificity is governed by two inner loops, CBL1 and CBL2, involved in calcium binding as well as by three outer loops, L1, L2, and L3. In summary, our study provides the structural basis for promiscuity and specificity of Epa adhesins, which might further contribute to developing anti-adhesive antimycotics and combating Candida colonization.
 
Structural basis for promiscuity and specificity during Candida glabrata invasion of host epithelia.,Maestre-Reyna M, Diderrich R, Veelders MS, Eulenburg G, Kalugin V, Bruckner S, Keller P, Rupp S, Mosch HU, Essen LO Proc Natl Acad Sci U S A. 2012 Oct 3. PMID:23035251<ref>PMID:23035251</ref>
 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 4afb" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Adhesin 3D structures|Adhesin 3D structures]]
*[[Adhesin 3D structures|Adhesin 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 2001]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Brueckner, S]]
[[Category: Brueckner S]]
[[Category: Diderrich, R]]
[[Category: Diderrich R]]
[[Category: Essen, L O]]
[[Category: Essen L-O]]
[[Category: Eulenburg, G]]
[[Category: Eulenburg G]]
[[Category: Kalugin, V]]
[[Category: Kalugin V]]
[[Category: Keller, P]]
[[Category: Keller P]]
[[Category: Maestre-Reyna, M]]
[[Category: Maestre-Reyna M]]
[[Category: Moesch, H U]]
[[Category: Moesch H-U]]
[[Category: Rupp, S]]
[[Category: Rupp S]]
[[Category: Veelders, M S]]
[[Category: Veelders MS]]
[[Category: Cell adhesion]]
[[Category: Lectin]]
[[Category: Pathogenicity]]
[[Category: Tissue invasion]]

Latest revision as of 10:14, 1 May 2024

Crystal Structure of subtype-switched Epithelial Adhesin 1 to 3 A domain (Epa1to3A) from Candida glabrata in complex with glycerolCrystal Structure of subtype-switched Epithelial Adhesin 1 to 3 A domain (Epa1to3A) from Candida glabrata in complex with glycerol

Structural highlights

4afb is a 1 chain structure with sequence from Candida glabrata. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q6VBJ0_CANGB

See Also

4afb, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=4afb&oldid=4137324"