2lrk: Difference between revisions

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2lrk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LRK FirstGlance]. <br>
<table><tr><td colspan='2'>[[2lrk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LRK FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lrk OCA], [https://pdbe.org/2lrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lrk RCSB], [https://www.ebi.ac.uk/pdbsum/2lrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lrk ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lrk OCA], [https://pdbe.org/2lrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lrk RCSB], [https://www.ebi.ac.uk/pdbsum/2lrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lrk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[https://www.uniprot.org/uniprot/PTHP_ECOLI PTHP_ECOLI] General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the permease (enzymes II/III).
[https://www.uniprot.org/uniprot/PTHP_ECOLI PTHP_ECOLI] General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the permease (enzymes II/III).
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The solution structure of the complex of enzyme IIA of the N,N-diacetylchitobiose (Chb) transporter with the histidine phosphocarier protein HPr has been solved by NMR. The IIAChb-HPr complex completes the structure elucidation of representative cytoplasmic complexes for all four sugar branches of the bacterial phosphoryl transfer system (PTS). The active site His-89 of IIAChb was mutated to Glu to mimic the phosphorylated state. IIAChb(H89E) and HPr form a weak complex with a KD of ~0.7 mM. The interacting binding surfaces, concave for IIAChb and convex for HPr, complement each other in terms of shape, residue type and charge distribution, with predominantly hydrophobic residues, interspersed by some uncharged polar residues, located centrally, and polar and charged residues at the periphery. The active site histidine of HPr, His15, is buried within the active site cleft of IIAChb formed at the interface of two adjacent subunits of the IIAChb trimer, thereby coming into close proximity with the active site residue, H89E, of IIAChb. A His89-P-His15 pentacoordinate phosphoryl transition state can readily be modeled without necessitating any significant conformational changes, thereby facilitating rapid phosphoryl transfer. Comparison of the IIAChb-HPr complex with the IIAChb-IIBChb complex, as well as with other cytoplasmic complexes of the PTS, highlights a unifying mechanism for recognition of structurally diverse partners. This involves generating similar binding surfaces from entirely different underlying structural elements, large interaction surfaces coupled with extensive redundancy, and side chain conformational plasticity to optimize diverse sets of intermolecular interactions.
Solution structure of the IIAChitobiose-HPr complex of the N,N'-Diacetylchitobiose Branch of the Escherichia coli Phosphotransferase system.,Jung YS, Cai M, Clore GM J Biol Chem. 2012 May 16. PMID:22593574<ref>PMID:22593574</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 2lrk" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Phosphocarrier protein HPr 3D structures|Phosphocarrier protein HPr 3D structures]]
*[[Phosphocarrier protein HPr 3D structures|Phosphocarrier protein HPr 3D structures]]
== References ==
<references/>
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</StructureSection>
</StructureSection>

Latest revision as of 09:57, 1 May 2024

Solution Structures of the IIA(Chitobiose)-HPr complex of the N,N'-DiacetylchitobioseSolution Structures of the IIA(Chitobiose)-HPr complex of the N,N'-Diacetylchitobiose

Structural highlights

2lrk is a 4 chain structure with sequence from Escherichia coli K-12. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PTHP_ECOLI General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the permease (enzymes II/III).

See Also

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