1rk7: Difference between revisions

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[[Image:1rk7.jpg|left|200px]]
[[Image:1rk7.jpg|left|200px]]


{{Structure
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|PDB= 1rk7 |SIZE=350|CAPTION= <scene name='initialview01'>1rk7</scene>
The line below this paragraph, containing "STRUCTURE_1rk7", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND=
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span>
or leave the SCENE parameter empty for the default display.
|GENE= SOD1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-->
|DOMAIN=
{{STRUCTURE_1rk7|  PDB=1rk7 |  SCENE= }}  
|RELATEDENTRY=[[1ba9|1ba9]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rk7 OCA], [http://www.ebi.ac.uk/pdbsum/1rk7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rk7 RCSB]</span>
}}


'''Solution structure of apo Cu,Zn Superoxide Dismutase: role of metal ions in protein folding'''
'''Solution structure of apo Cu,Zn Superoxide Dismutase: role of metal ions in protein folding'''
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[[Category: Cramaro, F.]]
[[Category: Cramaro, F.]]
[[Category: Viezzoli, M S.]]
[[Category: Viezzoli, M S.]]
[[Category: apo form of monomeric mutant of cu,zn sod]]
[[Category: Apo form of monomeric mutant of cu,zn sod]]
[[Category: nmr]]
[[Category: Nmr]]
[[Category: q133m2sod]]
[[Category: Q133m2sod]]
[[Category: solution structure]]
[[Category: Solution structure]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 07:35:54 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:29:18 2008''

Revision as of 07:35, 3 May 2008

File:1rk7.jpg

Template:STRUCTURE 1rk7

Solution structure of apo Cu,Zn Superoxide Dismutase: role of metal ions in protein folding


OverviewOverview

The solution structure of the demetalated copper, zinc superoxide dismutase is obtained for the monomeric Glu133Gln/Phe50Glu/Gly51Glu mutant through NMR spectroscopy. The demetalated protein still has a well-defined tertiary structure; however, two beta-strands containing two copper ligands (His46 and His48, beta4) and one zinc ligand (Asp83, beta5) are shortened, and the sheet formed by these strands and strands beta7 and beta8 moves away from the other strands of the beta-barrel to form an open clam with respect to a closed conformation in the holoprotein. Furthermore, loop IV which contains three zinc ligands (His63, His71, and His80) and loop VII which contributes to the definition of the active cavity channel are severely disordered, and experience extensive mobility as it results from thorough (15)N relaxation measurements. These structural and mobility data, if compared with those of the copper-depleted protein and holoprotein, point out the role of each metal ion in the protein folding, leading to the final tertiary structure of the holoprotein, and provide hints for the mechanisms of metal delivery by metal chaperones.

DiseaseDisease

Known disease associated with this structure: Amyotrophic lateral sclerosis, due to SOD1 deficiency OMIM:[147450]

About this StructureAbout this Structure

1RK7 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

Solution structure of Apo Cu,Zn superoxide dismutase: role of metal ions in protein folding., Banci L, Bertini I, Cramaro F, Del Conte R, Viezzoli MS, Biochemistry. 2003 Aug 19;42(32):9543-53. PMID:12911296 Page seeded by OCA on Sat May 3 07:35:54 2008

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