5xr6: Difference between revisions

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<StructureSection load='5xr6' size='340' side='right'caption='[[5xr6]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5xr6' size='340' side='right'caption='[[5xr6]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5xr6]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XR6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5XR6 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5xr6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XR6 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5xr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xr6 OCA], [http://pdbe.org/5xr6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xr6 RCSB], [http://www.ebi.ac.uk/pdbsum/5xr6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xr6 ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xr6 OCA], [https://pdbe.org/5xr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xr6 RCSB], [https://www.ebi.ac.uk/pdbsum/5xr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xr6 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RAA1A_ARATH RAA1A_ARATH]] Involved in auxin-mediated response. May be involved in vesicle trafficking of components involved in polar auxin transport. Binds GTP and GDP and possesses intrinsic GTPase activity.<ref>PMID:19199049</ref> <ref>PMID:8013629</ref>
[https://www.uniprot.org/uniprot/RAA1A_ARATH RAA1A_ARATH] Involved in auxin-mediated response. May be involved in vesicle trafficking of components involved in polar auxin transport. Binds GTP and GDP and possesses intrinsic GTPase activity.<ref>PMID:19199049</ref> <ref>PMID:8013629</ref>  


==See Also==
==See Also==
*[[Ras-related protein Rab|Ras-related protein Rab]]
*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chang, J H]]
[[Category: Chang JH]]
[[Category: Yun, J S]]
[[Category: Yun JS]]
[[Category: Arabidopsis thaliana]]
[[Category: Cellular transportation]]
[[Category: G-protein]]
[[Category: Gtpase]]
[[Category: Protein transport]]

Latest revision as of 13:19, 27 March 2024

Crystal structure of RabA1a in complex with GppNHpCrystal structure of RabA1a in complex with GppNHp

Structural highlights

5xr6 is a 2 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RAA1A_ARATH Involved in auxin-mediated response. May be involved in vesicle trafficking of components involved in polar auxin transport. Binds GTP and GDP and possesses intrinsic GTPase activity.[1] [2]

See Also

References

  1. ↑ Koh EJ, Kwon YR, Kim KI, Hong SW, Lee H. Altered ARA2 (RABA1a) expression in Arabidopsis reveals the involvement of a Rab/YPT family member in auxin-mediated responses. Plant Mol Biol. 2009 May;70(1-2):113-22. doi: 10.1007/s11103-009-9460-7. Epub, 2009 Feb 6. PMID:19199049 doi:http://dx.doi.org/10.1007/s11103-009-9460-7
  2. ↑ Anai T, Matsui M, Nomura N, Ishizaki R, Uchimiya H. In vitro mutation analysis of Arabidopsis thaliana small GTP-binding proteins and detection of GAP-like activities in plant cells. FEBS Lett. 1994 Jun 13;346(2-3):175-80. PMID:8013629

5xr6, resolution 2.60Å

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