6nt7: Difference between revisions
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<SX load='6nt7' size='340' side='right' viewer='molstar' caption='[[6nt7]], [[Resolution|resolution]] 4.00Å' scene=''> | <SX load='6nt7' size='340' side='right' viewer='molstar' caption='[[6nt7]], [[Resolution|resolution]] 4.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6nt7]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[6nt7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NT7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6NT7 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1SY:CGAMP'>1SY</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6nt7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nt7 OCA], [https://pdbe.org/6nt7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6nt7 RCSB], [https://www.ebi.ac.uk/pdbsum/6nt7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6nt7 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
== | [https://www.uniprot.org/uniprot/STING_CHICK STING_CHICK] Facilitator of innate immune signaling that acts as a sensor of cytosolic DNA from bacteria and viruses and promotes the production of type I interferon (IFN-alpha and IFN-beta) (By similarity). Innate immune response is triggered in response to non-CpG double-stranded DNA from viruses and bacteria delivered to the cytoplasm (By similarity). Acts by binding cyclic dinucleotides: recognizes and binds cyclic di-GMP (c-di-GMP), a second messenger produced by bacteria, and cyclic GMP-AMP (cGAMP), a messenger produced by CGAS in response to DNA virus in the cytosol (PubMed:30842659). Upon binding of c-di-GMP or cGAMP, STING1 oligomerizes and is able to activate both NF-kappa-B and IRF3 transcription pathways to induce expression of type I interferon and exert a potent anti-viral state (PubMed:30842659). In addition to promote the production of type I interferons, plays a direct role in autophagy (By similarity). Following cGAMP-binding, STING1 buds from the endoplasmic reticulum into COPII vesicles, which then form the endoplasmic reticulum-Golgi intermediate compartment (ERGIC) (By similarity). The ERGIC serves as the membrane source for LC3 lipidation, leading to formation of autophagosomes that target cytosolic DNA or DNA viruses for degradation by the lysosome (By similarity). The autophagy- and interferon-inducing activities can be uncoupled and autophagy induction is independent of TBK1 phosphorylation (By similarity). Exhibits 2',3' phosphodiester linkage-specific ligand recognition: can bind both 2'-3' linked cGAMP and 3'-3' linked cGAMP but is preferentially activated by 2'-3' linked cGAMP (By similarity).[UniProtKB:Q86WV6]<ref>PMID:30842659</ref> | ||
==See Also== | ==See Also== | ||
*[[Stimulator of interferon genes|Stimulator of interferon genes]] | *[[Stimulator of interferon genes protein|Stimulator of interferon genes protein]] | ||
*[[Stimulator of interferon genes protein 3D structures|Stimulator of interferon genes protein 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</SX> | </SX> | ||
[[Category: | [[Category: Gallus gallus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Bai | [[Category: Bai X]] | ||
[[Category: Chen | [[Category: Chen ZJ]] | ||
[[Category: Shang | [[Category: Shang G]] | ||
[[Category: Zhang | [[Category: Zhang C]] | ||
[[Category: Zhang | [[Category: Zhang X]] | ||