3af5: Difference between revisions

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<StructureSection load='3af5' size='340' side='right'caption='[[3af5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='3af5' size='340' side='right'caption='[[3af5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3af5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AF5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3af5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AF5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3af6|3af6]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH1404 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70601 Pyrococcus horikoshii])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3af5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3af5 OCA], [https://pdbe.org/3af5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3af5 RCSB], [https://www.ebi.ac.uk/pdbsum/3af5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3af5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3af5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3af5 OCA], [https://pdbe.org/3af5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3af5 RCSB], [https://www.ebi.ac.uk/pdbsum/3af5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3af5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O50112_PYRHO O50112_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Ishikawa, H]]
[[Category: Ishikawa H]]
[[Category: Kuramitsu, S]]
[[Category: Kuramitsu S]]
[[Category: Masui, R]]
[[Category: Masui R]]
[[Category: Nakagawa, N]]
[[Category: Nakagawa N]]
[[Category: Nishida, Y]]
[[Category: Nishida Y]]
[[Category: Archaea]]
[[Category: Archaeal cpsf]]
[[Category: Beta-casp family]]
[[Category: Hydrolase]]
[[Category: Kh domain]]
[[Category: Metallo-beta-lactamase superfamily]]
[[Category: Ribonuclease]]

Latest revision as of 17:00, 13 March 2024

The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshiiThe crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii

Structural highlights

3af5 is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O50112_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3af5, resolution 2.60Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA