3hid: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
Line 3: Line 3:
<StructureSection load='3hid' size='340' side='right'caption='[[3hid]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3hid' size='340' side='right'caption='[[3hid]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3hid]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HID FirstGlance]. <br>
<table><tr><td colspan='2'>[[3hid]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HID FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gi:16120713, purA, y0635, YPO0378, YP_0534 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Adenylosuccinate_synthase Adenylosuccinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.4 6.3.4.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hid OCA], [https://pdbe.org/3hid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hid RCSB], [https://www.ebi.ac.uk/pdbsum/3hid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hid ProSAT], [https://www.topsan.org/Proteins/CSGID/3hid TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hid OCA], [https://pdbe.org/3hid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hid RCSB], [https://www.ebi.ac.uk/pdbsum/3hid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hid ProSAT], [https://www.topsan.org/Proteins/CSGID/3hid TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/PURA_YERPE PURA_YERPE]] Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity).  
[https://www.uniprot.org/uniprot/PURA_YERPE PURA_YERPE] Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Adenylosuccinate synthase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Yersinia pestis co92]]
[[Category: Yersinia pestis CO92]]
[[Category: Anderson, W]]
[[Category: Anderson W]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A]]
[[Category: Peterson S]]
[[Category: Peterson, S]]
[[Category: Zhang R]]
[[Category: Zhang, R]]
[[Category: Zhou M]]
[[Category: Zhou, M]]
[[Category: Adenylosuccinate synthetase]]
[[Category: Csgid]]
[[Category: Cytoplasm]]
[[Category: Gtp-binding]]
[[Category: Ligase]]
[[Category: Magnesium]]
[[Category: Metal-binding]]
[[Category: Nucleotide-binding]]
[[Category: Pura]]
[[Category: Purine biosynthesis]]
[[Category: Purine ribonucleotide biosynthesis]]
[[Category: Virulence associated factor]]

Latest revision as of 13:00, 21 February 2024

Crystal structure of adenylosuccinate synthetase from Yersinia pestis CO92Crystal structure of adenylosuccinate synthetase from Yersinia pestis CO92

Structural highlights

3hid is a 1 chain structure with sequence from Yersinia pestis CO92. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PURA_YERPE Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3hid, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3hid&oldid=4065308"