2p37: Difference between revisions

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<StructureSection load='2p37' size='340' side='right'caption='[[2p37]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2p37' size='340' side='right'caption='[[2p37]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2p37]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_maritima Canavalia maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P37 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2p37]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_rosea Canavalia rosea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P37 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZEL:'>ZEL</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=ZEL:methyl+beta-D-altropyranoside'>ZEL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p37 OCA], [https://pdbe.org/2p37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p37 RCSB], [https://www.ebi.ac.uk/pdbsum/2p37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p37 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p37 OCA], [https://pdbe.org/2p37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p37 RCSB], [https://www.ebi.ac.uk/pdbsum/2p37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p37 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/CONA_CANRO CONA_CANRO]] Glucose/D-mannose specific lectin.  
[https://www.uniprot.org/uniprot/CONA_CANRO CONA_CANRO] Glucose/D-mannose specific lectin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p37 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p37 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Plant lectins, especially those purified from species of the Leguminosae family, represent the best studied group of carbohydrate-binding proteins. The legume lectins from Diocleinae subtribe are highly similar proteins that present significant differences in the potency/efficacy of their biological activities. The structural studies of the interactions between lectins and sugars may clarify the origin of the distinct biological activities observed in this high similar class of proteins. In this way, this work presents a crystallographic study of the ConM and CGL (agglutinins from Canavalia maritima and Canavalia gladiata, respectively) in the following complexes: ConM/CGL:Man(alpha1-2)Man(alpha1-O)Me, ConM/CGL:Man(alpha1-3)Man(alpha1-O)Me and ConM/CGL:Man(alpha1-4)Man(alpha1-O)Me, which crystallized in different conditions and space group from the native proteins. The structures were solved by molecular replacement, presenting satisfactory values for R(factor) and R(free). Comparisons between ConM, CGL and ConA (Canavalia ensiformis lectin) binding mode with the dimannosides in subject, presented different interactions patterns, which may account for a structural explanation of the distincts biological properties observed in the lectins of Diocleinae subtribe.
Structural analysis of Canavalia maritima and Canavalia gladiata lectins complexed with different dimannosides: new insights into the understanding of the structure-biological activity relationship in legume lectins.,Bezerra GA, Oliveira TM, Moreno FB, de Souza EP, da Rocha BA, Benevides RG, Delatorre P, de Azevedo WF Jr, Cavada BS J Struct Biol. 2007 Nov;160(2):168-76. Epub 2007 Aug 16. PMID:17881248<ref>PMID:17881248</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 2p37" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Concanavalin 3D structures|Concanavalin 3D structures]]
*[[Concanavalin 3D structures|Concanavalin 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Canavalia maritima]]
[[Category: Canavalia rosea]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Azevedo, W de]]
[[Category: Benevides RG]]
[[Category: Benevides, R G]]
[[Category: Bezerra GA]]
[[Category: Bezerra, G A]]
[[Category: Cavada BS]]
[[Category: Cavada, B S]]
[[Category: Delatorre P]]
[[Category: Delatorre, P]]
[[Category: Moreno FBMB]]
[[Category: Moreno, F B.M B]]
[[Category: Oliveira TM]]
[[Category: Oliveira, T M]]
[[Category: Rocha BAM]]
[[Category: Rocha, B A.M]]
[[Category: Souza EP]]
[[Category: Souza, E P]]
[[Category: De Azevedo Jr W]]
[[Category: Canavalia gladiata lectin]]
[[Category: Dimannoside]]
[[Category: Sugar binding protein]]

Latest revision as of 12:07, 21 February 2024

Crystal structure of a lectin from Canavalia maritima seeds (CML) in complex with man1-3man-OMeCrystal structure of a lectin from Canavalia maritima seeds (CML) in complex with man1-3man-OMe

Structural highlights

2p37 is a 4 chain structure with sequence from Canavalia rosea. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CONA_CANRO Glucose/D-mannose specific lectin.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2p37, resolution 2.10Å

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