3aq2: Difference between revisions

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 <StructureSection load='3aq2' size='340' side='right'caption='[[3aq2]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3aq2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrvi Agrvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQ2 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3aq2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_vitis Agrobacterium vitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQ2 FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3aq3|3aq3]], [[3aq4|3aq4]]</div></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aq2 OCA], [https://pdbe.org/3aq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aq2 RCSB], [https://www.ebi.ac.uk/pdbsum/3aq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aq2 ProSAT]</span></td></tr>
 </table>
-<div style="background-color:#fffaf0;">
+== Function ==
-== Publication Abstract from PubMed ==
+[https://www.uniprot.org/uniprot/Q44522_AGRVI Q44522_AGRVI]
-The Agrobacterium Ti plasmid (T-DNA) 6b proteins interact with many different host proteins implicated in plant cell proliferation. Here, we show that Arabidopsis plants overexpressing 6b display microRNA (miRNA) deficiency by directly targeting SERRATE and AGO1 via a specific loop fragment (residues 40-55). In addition, we report the crystal structures of Agrobacterium tumefaciens AK6b at 2.1 A, Agrobacterium vitis AB6b at 1.65 A, and Arabidopsis ADP ribosylation factor (ARF) at 1.8 A. The 6b structure adopts an ADP-ribosylating toxin fold closely related to cholera toxin. In vitro ADP ribosylation analysis demonstrates that 6b represents a new toxin family, with Tyr 66, Thr 93, and Tyr 153 as the ADP ribosylation catalytic residues in the presence of Arabidopsis ARF and GTP. Our work provides molecular insights, suggesting that 6b regulates plant cell growth by the disturbance of the miRNA pathway through its ADP ribosylation activity.
-Molecular insights into plant cell proliferation disturbance by Agrobacterium protein 6b.,Wang M, Soyano T, Machida S, Yang JY, Jung C, Chua NH, Yuan YA Genes Dev. 2011 Jan 1;25(1):64-76. Epub 2010 Dec 14. PMID:21156810<ref>PMID:21156810</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 3aq2" style="background-color:#fffaf0;"></div>
-== References ==
-<references/>
 __TOC__
 </StructureSection>
-[[Category: Agrvi]]
+[[Category: Agrobacterium vitis]]
 [[Category: Large Structures]]
-[[Category: Wang, M M]]
+[[Category: Wang MM]]
-[[Category: Yuan, Y A]]
+[[Category: Yuan YA]]
-[[Category: Adp-ribosylation fold]]
-[[Category: Mirna machinery]]
-[[Category: Toxin]]