7acx: Difference between revisions
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==== | ==H/L (SLPH/SLPL) complex from C. difficile (R7404 strain)== | ||
<StructureSection load='7acx' size='340' side='right'caption='[[7acx]]' scene=''> | <StructureSection load='7acx' size='340' side='right'caption='[[7acx]], [[Resolution|resolution]] 2.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | <table><tr><td colspan='2'>[[7acx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile Clostridioides difficile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ACX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ACX FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7acx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7acx OCA], [https://pdbe.org/7acx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7acx RCSB], [https://www.ebi.ac.uk/pdbsum/7acx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7acx ProSAT]</span></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7acx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7acx OCA], [https://pdbe.org/7acx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7acx RCSB], [https://www.ebi.ac.uk/pdbsum/7acx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7acx ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9AEM2_CLODI Q9AEM2_CLODI] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Many bacteria and archaea possess a two-dimensional protein array, or S-layer, that covers the cell surface and plays crucial roles in cell physiology. Here, we report the crystal structure of SlpA, the main S-layer protein of the bacterial pathogen Clostridioides difficile, and use electron microscopy to study S-layer organisation and assembly. The SlpA crystal lattice mimics S-layer assembly in the cell, through tiling of triangular prisms above the cell wall, interlocked by distinct ridges facing the environment. Strikingly, the array is very compact, with pores of only ~10 A in diameter, compared to other S-layers (30-100 A). The surface-exposed flexible ridges are partially dispensable for overall structure and assembly, although a mutant lacking this region becomes susceptible to lysozyme, an important molecule in host defence. Thus, our work gives insights into S-layer organisation and provides a basis for development of C. difficile-specific therapeutics. | |||
Structure and assembly of the S-layer in C. difficile.,Lanzoni-Mangutchi P, Banerji O, Wilson J, Barwinska-Sendra A, Kirk JA, Vaz F, O'Beirne S, Basle A, El Omari K, Wagner A, Fairweather NF, Douce GR, Bullough PA, Fagan RP, Salgado PS Nat Commun. 2022 Feb 25;13(1):970. doi: 10.1038/s41467-022-28196-w. PMID:35217634<ref>PMID:35217634</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 7acx" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Clostridioides difficile]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: | [[Category: Barwinska-Sendra A]] | ||
[[Category: Basle A]] | |||
[[Category: El Omari K]] | |||
[[Category: Lanzoni-Mangutchi P]] | |||
[[Category: Salgado PS]] | |||
[[Category: Wagner A]] | |||