6ymr: Difference between revisions

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==Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin==
==Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin==
<StructureSection load='6ymr' size='340' side='right'caption='[[6ymr]]' scene=''>
<StructureSection load='6ymr' size='340' side='right'caption='[[6ymr]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YMR FirstGlance]. <br>
<table><tr><td colspan='2'>[[6ymr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YMR FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ymr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ymr OCA], [https://pdbe.org/6ymr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ymr RCSB], [https://www.ebi.ac.uk/pdbsum/6ymr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ymr ProSAT]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=OZE:(((R)-1-(((benzyloxy)carbonyl)amino)-2-phenylethyl)oxidophosphoryl)glycyl-L-leucinate'>OZE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ymr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ymr OCA], [https://pdbe.org/6ymr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ymr RCSB], [https://www.ebi.ac.uk/pdbsum/6ymr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ymr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/THER_GEOSE THER_GEOSE] Extracellular zinc metalloprotease.<ref>PMID:3149972</ref>
==See Also==
*[[Thermolysin 3D structures|Thermolysin 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Heine A]]
[[Category: Heine A]]
[[Category: Klebe G]]
[[Category: Klebe G]]
[[Category: Kljajic M]]
[[Category: Kljajic M]]

Latest revision as of 16:30, 24 January 2024

Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on ThermolysinStructural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin

Structural highlights

6ymr is a 1 chain structure with sequence from Geobacillus stearothermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

THER_GEOSE Extracellular zinc metalloprotease.[1]

See Also

References

  1. Kubo M, Imanaka T. Cloning and nucleotide sequence of the highly thermostable neutral protease gene from Bacillus stearothermophilus. J Gen Microbiol. 1988 Jul;134(7):1883-92. PMID:3149972

6ymr, resolution 1.60Å

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OCA